RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 OR4C11Q6IEV9 310 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 RAPH1Q70E73 1250 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 ISCA2Q86U28 154 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 CTAGE3PQ8IX95 158 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 RNF175Q8N4F7 328 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 PAQR8Q8TEZ7 354 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 SPACA9Q96E40 222 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-231ENST00000488905 ERP44Q9BS26 406 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 RPF2Q9H7B2 306 aaKnown RBP16.99■□□□□ 0.31
HDAC6-231ENST00000488905 SPRR3Q9UBC9 169 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 RNF14Q9UBS8 474 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 Q9UFV3 132 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 PHF11Q9UIL8 331 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.99■□□□□ 0.31
HDAC6-231ENST00000488905 TRGV5A0A0B4J1U4 118 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 PLPP1O14494 284 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 GSTA2P09210 222 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 KCNJ2P63252 427 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 SLAMF1Q13291 335 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 KBTBD12Q3ZCT8 623 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 WLSQ5T9L3 541 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 GRTP1Q5TC63 336 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 PRAMEF20Q5VT98 475 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 SLC22A10Q63ZE4 541 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 LYPD8Q6UX82 237 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 DGAT2L6Q6ZPD8 337 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 C3orf62Q6ZUJ4 267 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 TBC1D1Q86TI0 1168 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-231ENST00000488905 FBXW8Q8N3Y1 598 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 HUS1BQ8NHY5 278 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 TANKQ92844 425 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 RGMAQ96B86 450 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 PPWD1Q96BP3 646 aaKnown RBP16.98■□□□□ 0.31
HDAC6-231ENST00000488905 CENPKQ9BS16 269 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 EXO5Q9H790 373 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 NMRAL1Q9HBL8 299 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 DMRT3Q9NQL9 472 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.98■□□□□ 0.31
HDAC6-231ENST00000488905 GRHL1Q9NZI5 618 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 ADGRE2Q9UHX3 823 aa16.98■□□□□ 0.31
HDAC6-231ENST00000488905 BOKQ9UMX3 212 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-231ENST00000488905 PRRC2AP48634 2157 aaKnown RBP16.98■□□□□ 0.31
HDAC6-231ENST00000488905 ABCA4P78363 2273 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 FAM187AA6NFU0 413 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 LRRC3CA6NJW4 275 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 PRKRAO75569 313 aaKnown RBP16.97■□□□□ 0.31
HDAC6-231ENST00000488905 FAM155BO75949 473 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 ZWINTO95229 277 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 ALOX15P16050 662 aaPredicted RBP16.97■□□□□ 0.31
HDAC6-231ENST00000488905 EPB42P16452 691 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 ADH7P40394 386 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 ART1P52961 327 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 HNRNPH2P55795 449 aaKnown RBP16.97■□□□□ 0.31
HDAC6-231ENST00000488905 TBL3Q12788 808 aaKnown RBP16.97■□□□□ 0.31
HDAC6-231ENST00000488905 BIKQ13323 160 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 C18orf63Q68DL7 685 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 GPR180Q86V85 440 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 DND1Q8IYX4 353 aaKnown RBP16.97■□□□□ 0.31
HDAC6-231ENST00000488905 ST13P4Q8IZP2 240 aaPredicted RBP16.97■□□□□ 0.31
HDAC6-231ENST00000488905 ZCCHC7Q8N3Z6 543 aaKnown RBP16.97■□□□□ 0.31
HDAC6-231ENST00000488905 SLC15A4Q8N697 577 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 PPM1NQ8N819 430 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 FAM13CQ8NE31 585 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 MYRIPQ8NFW9 859 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 RBM18Q96H35 190 aaKnown RBP16.97■□□□□ 0.31
HDAC6-231ENST00000488905 GAL3ST4Q96RP7 486 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 CNPPD1Q9BV87 410 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 GRPEL1Q9HAV7 217 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 ZFP64Q9NPA5 681 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 IGSF5Q9NSI5 407 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 L3MBTL1Q9Y468 752 aa16.97■□□□□ 0.31
HDAC6-231ENST00000488905 CHCHD2Q9Y6H1 151 aaPredicted RBP16.97■□□□□ 0.31
HDAC6-231ENST00000488905 FAM47E-STBD1D6RA91 191 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 RAD51CO43502 376 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 LTA4HP09960 611 aaKnown RBP16.96■□□□□ 0.31
HDAC6-231ENST00000488905 FBXO45P0C2W1 286 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 RFPL3SP0C7P2 107 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 GABRA1P14867 456 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 CRABP2P29373 138 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 TLX1P31314 330 aaPredicted RBP16.96■□□□□ 0.31
HDAC6-231ENST00000488905 BUD31P41223 144 aaPredicted RBP16.96■□□□□ 0.31
HDAC6-231ENST00000488905 PIK3CBP42338 1070 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 HERVK_113P63132 956 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 ERVK-8P63133 956 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 SPRED3Q2MJR0 410 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 SLC25A35Q3KQZ1 300 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 RNF111Q6ZNA4 994 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 SLC29A4Q7RTT9 530 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 MYLK4Q86YV6 388 aaPredicted RBP16.96■□□□□ 0.31
HDAC6-231ENST00000488905 LIX1LQ8IVB5 337 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 LRRC25Q8N386 305 aaPredicted RBP16.96■□□□□ 0.31
HDAC6-231ENST00000488905 TEX9Q8N6V9 391 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 OR10G3Q8NGC4 313 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 MTERF1Q99551 399 aaKnown RBP16.96■□□□□ 0.31
HDAC6-231ENST00000488905 PELOQ9BRX2 385 aaKnown RBP16.96■□□□□ 0.31
HDAC6-231ENST00000488905 ERVK-6Q9BXR3 956 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 WWTR1Q9GZV5 400 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 ERVK-19Q9WJR5 959 aa16.96■□□□□ 0.31
HDAC6-231ENST00000488905 MPDZO75970 2070 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 SYCE1LA8MT33 242 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms