RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TMEM91Q6ZNR0 172 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 LUZP2Q86TE4 346 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 TLK2Q86UE8 772 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 NPAS3Q8IXF0 933 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ZFP41Q8N8Y5 198 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 L3MBTL4Q8NA19 623 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 HJURPQ8NCD3 748 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 OR4A15Q8NGL6 344 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 OR6M1Q8NGM8 313 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 OR8J1Q8NGP2 316 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 PKP4Q99569 1192 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 P2RY13Q9BPV8 354 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 RBCK1Q9BYM8 510 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 REG4Q9BYZ8 158 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 MS4A7Q9GZW8 240 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SHARPINQ9H0F6 387 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 TVP23BQ9NYZ1 205 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 TESQ9UGI8 421 aaKnown RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ATP6V1HQ9UI12 483 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SCML2Q9UQR0 700 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 PCDHB7Q9Y5E2 793 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 A0A0G2JLL6 359 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 TRBC2A0A5B9 178 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ARRDC5A6NEK1 342 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 PRRG1O14668 218 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 NUPL2O15504 423 aaKnown RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 PRKYO43930 277 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SH3BGRLO75368 114 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SOD1P00441 154 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 PCSK2P16519 638 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ELK1P19419 428 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ZP3P21754 424 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 RPL9P32969 192 aaKnown RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 BTCP35070 178 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 XKP51811 444 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 LIM2P55344 173 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 WDR5P61964 334 aaKnown RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 TPBGQ13641 420 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SEC23BQ15437 767 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ZNF792Q3KQV3 632 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 CLVS2Q5SYC1 327 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 CERS6Q6ZMG9 384 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 PRRT2Q7Z6L0 340 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 IQCF1Q8N6M8 205 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 IL17RCQ8NAC3 791 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SRFBP1Q8NEF9 429 aaKnown RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 TTLQ8NG68 377 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 OR7G3Q8NG95 312 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 NXPE2Q96DL1 559 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 GPR63Q9BZJ6 419 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ABCG5Q9H222 651 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 OR51J1Q9H342 316 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ASB8Q9H765 288 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 NUDT15Q9NV35 164 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 PTTG3PQ9NZH4 202 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ZMAT5Q9UDW3 170 aaKnown RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SLC22A14Q9Y267 594 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 STON1Q9Y6Q2 735 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 DNAH12Q6ZR08 3092 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 LOC105369274A0A096LPK9 316 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 hCG_1807616A0A1W2PRN6 198 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 F8W810 466 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 GAPDHSO14556 408 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 HRGP04196 525 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 OR56A5P0C7T3 313 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 TACR2P21452 398 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 IDSP22304 550 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 AOAHP28039 575 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 FGF9P31371 208 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 DSTNP60981 165 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 RPL6Q02878 288 aaKnown RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 CRYZQ08257 329 aaKnown RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 INSL4Q14641 139 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 PUS10Q3MIT2 529 aaKnown RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 GCNT6Q5T4J0 391 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 CD276Q5ZPR3 534 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 RAET1GQ6H3X3 334 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 BHLHB9Q6PI77 547 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 UBE2Q1Q7Z7E8 422 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 ADGRG2Q8IZP9 1017 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 RBFAQ8N0V3 343 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 OR4N4Q8N0Y3 316 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 THEM5Q8N1Q8 247 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 VPS37AQ8NEZ2 397 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 MTERF1Q99551 399 aaKnown RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 THAP7Q9BT49 309 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 IFT46Q9NQC8 304 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 FAM105AQ9NUU6 356 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 VPS29Q9UBQ0 182 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 EXTL2Q9UBQ6 330 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 MAB21L2Q9Y586 359 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 ADAP00813 363 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 POMCP01189 267 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 ALPIP09923 528 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 ITPKAP23677 461 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 DNASE1P24855 282 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 GABRA5P31644 462 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 CD79BP40259 229 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 SMSP52788 366 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms