RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 PDYNP01213 254 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 SHBGP04278 402 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 KLK1P06870 262 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 STSP08842 583 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 PIK3R1P27986 724 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 HK2P52789 917 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 RNF4P78317 190 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 LCP2Q13094 533 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF678Q5SXM1 525 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 MRM1Q6IN84 353 aaKnown RBP11.97□□□□□ -0.49
CHMP3-208ENST00000486404 RNF111Q6ZNA4 994 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 COMMD6Q7Z4G1 85 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 ST13P4Q8IZP2 240 aaPredicted RBP11.97□□□□□ -0.49
CHMP3-208ENST00000486404 CPSF7Q8N684 471 aaKnown RBP11.97□□□□□ -0.49
CHMP3-208ENST00000486404 CCNYL1Q8N7R7 359 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF321PQ8N8H1 164 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 CCDC63Q8NA47 563 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 MYRIPQ8NFW9 859 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 OR8K3Q8NH51 312 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 SLC22A8Q8TCC7 542 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 EPS8L3Q8TE67 593 aaKnown RBP11.97□□□□□ -0.49
CHMP3-208ENST00000486404 CCDC126Q96EE4 140 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 FBXL20Q96IG2 436 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 GPR137Q96N19 417 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 RASL10BQ96S79 203 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 HBEGFQ99075 208 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 LIN28AQ9H9Z2 209 aaKnown RBP11.97□□□□□ -0.49
CHMP3-208ENST00000486404 BRF2Q9HAW0 419 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 DCDC2Q9UHG0 476 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 ADAM29Q9UKF5 820 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 ASB4Q9Y574 426 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 EML6Q6ZMW3 1958 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 EXPH5Q8NEV8 1989 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 A0A1B0GTL3 188 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 A0A1W2PR48 441 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 MANBAO00462 879 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 CDH16O75309 829 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 CRCPO75575 148 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 OR6B1O95007 311 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 ENO1P06733 434 aaKnown RBP11.96□□□□□ -0.49
CHMP3-208ENST00000486404 ABOP16442 354 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 HSD17B3P37058 310 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 SOX3P41225 446 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 PRKAA2P54646 552 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 GPR85P60893 370 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 ERVK-8P63133 956 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 CSTF3Q12996 717 aaKnown RBP11.96□□□□□ -0.49
CHMP3-208ENST00000486404 KRTCAP3Q53RY4 240 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 NDUFAF5Q5TEU4 345 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 OPN5Q6U736 354 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 IL20RBQ6UXL0 311 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 C16orf47Q6ZP98 133 aaPredicted RBP11.96□□□□□ -0.49
CHMP3-208ENST00000486404 SLC29A4Q7RTT9 530 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 MAMDC2Q7Z304 686 aaPredicted RBP11.96□□□□□ -0.49
CHMP3-208ENST00000486404 GHDCQ8N2G8 530 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 METTL4Q8N3J2 472 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 TMEM151AQ8N4L1 468 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 PSD4Q8NDX1 1056 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF721Q8TF20 911 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 MZB1Q8WU39 189 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 RIT1Q92963 219 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 PPWD1Q96BP3 646 aaKnown RBP11.96□□□□□ -0.49
CHMP3-208ENST00000486404 L3HYPDHQ96EM0 354 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 SENP5Q96HI0 755 aaPredicted RBP11.96□□□□□ -0.49
CHMP3-208ENST00000486404 IQCGQ9H095 443 aaKnown RBP11.96□□□□□ -0.49
CHMP3-208ENST00000486404 FARSBQ9NSD9 589 aaKnown RBP11.96□□□□□ -0.49
CHMP3-208ENST00000486404 TEX10Q9NXF1 929 aaPredicted RBP11.96□□□□□ -0.49
CHMP3-208ENST00000486404 ERVK-19Q9WJR5 959 aa11.96□□□□□ -0.49
CHMP3-208ENST00000486404 A0A1W2PPM1 405 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 GOLGA6L10A6NI86 522 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 ACOT7O00154 380 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 PPP6CO00743 305 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 COPEO14579 308 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 PEX1O43933 1283 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 SLC19A2O60779 497 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 ESRRBO95718 433 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 HSD3B1P14060 373 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 IMPDH1P20839 514 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 HSD3B2P26439 372 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 DEKP35659 375 aaKnown RBP11.95□□□□□ -0.5
CHMP3-208ENST00000486404 RFC3P40938 356 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 CCT5P48643 541 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 PKNOX1P55347 436 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 PLGLB1Q02325 96 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 IFFO1Q0D2I5 559 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 ZNF267Q14586 743 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-208ENST00000486404 SPRED3Q2MJR0 410 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 CCDC153Q494R4 210 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 UNC50Q53HI1 259 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 CFAP157Q5JU67 520 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 TCHHL1Q5QJ38 904 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-208ENST00000486404 MTFR2Q6P444 385 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 RTL4Q6ZR62 310 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 ZNF227Q86WZ6 799 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 TDRPQ86YL5 185 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 SULF2Q8IWU5 870 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 GALNT12Q8IXK2 581 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 C9orf40Q8IXQ3 194 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 C1orf52Q8N6N3 182 aaKnown RBP11.95□□□□□ -0.5
CHMP3-208ENST00000486404 NUBPLQ8TB37 319 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms