RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PDE9AO76083 593 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 ATP5F1P24539 256 aaPredicted RBP16.38■□□□□ 0.21
COL6A1-204ENST00000486023 ARFIP1P53367 373 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 CASP6P55212 293 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 ERVK-8P63133 956 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 ASPHQ12797 758 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 KRTCAP3Q53RY4 240 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 PAGE2Q7Z2X7 111 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 MAMDC2Q7Z304 686 aaPredicted RBP16.38■□□□□ 0.21
COL6A1-204ENST00000486023 ARMC10Q8N2F6 343 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 GAL3ST4Q96RP7 486 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 RASL10BQ96S79 203 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 DCDC2Q9UHG0 476 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 ERVK-19Q9WJR5 959 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 HIVEP3Q5T1R4 2406 aa16.38■□□□□ 0.21
COL6A1-204ENST00000486023 A0A1W2PS29 197 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 CDK2AP1O14519 115 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 HS6ST1O60243 411 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 SEMA3DO95025 777 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 ESRRAP11474 423 aaPredicted RBP16.37■□□□□ 0.21
COL6A1-204ENST00000486023 ABOP16442 354 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 IMPDH1P20839 514 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 PIK3R1P27986 724 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 HMOX2P30519 316 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 MAPK12P53778 367 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 IGLV3-21P80748 117 aaPredicted RBP16.37■□□□□ 0.21
COL6A1-204ENST00000486023 PLGLB1Q02325 96 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 C3AR1Q16581 482 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 GGTA1PQ4G0N0 100 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 SCIMPQ6UWF3 145 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 ST13P4Q8IZP2 240 aaPredicted RBP16.37■□□□□ 0.21
COL6A1-204ENST00000486023 CCDC63Q8NA47 563 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 METTL6Q8TCB7 284 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 ACMSDQ8TDX5 336 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 EPS8L3Q8TE67 593 aaKnown RBP16.37■□□□□ 0.21
COL6A1-204ENST00000486023 L2HGDHQ9H9P8 463 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 SUCOQ9UBS9 1254 aaKnown RBP16.37■□□□□ 0.21
COL6A1-204ENST00000486023 FETUBQ9UGM5 382 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 TINAGQ9UJW2 476 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 ZNF225Q9UK10 706 aa16.37■□□□□ 0.21
COL6A1-204ENST00000486023 SPTBN1Q01082 2364 aaKnown RBP16.37■□□□□ 0.21
COL6A1-204ENST00000486023 TLDC2A0PJX2 215 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 MANBAO00462 879 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 ZNF354AO60765 605 aaPredicted RBP16.36■□□□□ 0.21
COL6A1-204ENST00000486023 KRT6AP02538 564 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 KRT6BP04259 564 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 GSTA1P08263 222 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 DEKP35659 375 aaKnown RBP16.36■□□□□ 0.21
COL6A1-204ENST00000486023 KRT6CP48668 564 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 ALDH9A1P49189 494 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 BTKQ06187 659 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 BIKQ13323 160 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 NDUFAF5Q5TEU4 345 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 OR52E8Q6IFG1 317 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 GPRIN3Q6ZVF9 776 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 COMMD6Q7Z4G1 85 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 LCA5Q86VQ0 697 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 SLC22A9Q8IVM8 553 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 METTL4Q8N3J2 472 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 PSD4Q8NDX1 1056 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 C7orf57Q8NEG2 295 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 MZB1Q8WU39 189 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 RELTQ969Z4 430 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 ART5Q96L15 291 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 C1QTNF3Q9BXJ4 246 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 DEFB127Q9H1M4 99 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 C12orf65Q9H3J6 166 aaKnown RBP16.36■□□□□ 0.21
COL6A1-204ENST00000486023 NMRK1Q9NWW6 199 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 TRPS1Q9UHF7 1281 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 TIMM22Q9Y584 194 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 POLEQ07864 2286 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 ICE1Q9Y2F5 2266 aa16.36■□□□□ 0.21
COL6A1-204ENST00000486023 PINLYPA6NC86 204 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 ULK1O75385 1050 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 ERAL1O75616 437 aaKnown RBP16.35■□□□□ 0.21
COL6A1-204ENST00000486023 ESRRBO95718 433 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 MYL2P10916 166 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 CHN1P15882 459 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 NT5EP21589 574 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 PTGER1P34995 402 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 XKP51811 444 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 PRKAA2P54646 552 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 RASA2Q15283 850 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 C10orf62Q5T681 223 aaPredicted RBP16.35■□□□□ 0.21
COL6A1-204ENST00000486023 ZNF787Q6DD87 383 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 OPN5Q6U736 354 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 C3P1Q6ZMU1 363 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 RNF111Q6ZNA4 994 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 SLC29A4Q7RTT9 530 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 SPPL2CQ8IUH8 684 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 SIAH3Q8IW03 269 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 C9orf40Q8IXQ3 194 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 MMP21Q8N119 569 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 GHDCQ8N2G8 530 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 C1orf52Q8N6N3 182 aaKnown RBP16.35■□□□□ 0.21
COL6A1-204ENST00000486023 OR4K14Q8NGD5 310 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 OR8K3Q8NH51 312 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 FBXL20Q96IG2 436 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 KCNA7Q96RP8 456 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 PELOQ9BRX2 385 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms