RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 SERTAD2Q14140 314 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 HEPACAMQ14CZ8 416 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 SMU1Q2TAY7 513 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 NXNQ6DKJ4 435 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 ANKRD26P1Q6NSI1 321 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 TICAM1Q8IUC6 712 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 TMEM102Q8N9M5 508 aaPredicted RBP14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 RFWD2Q8NHY2 731 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 EXOSC8Q96B26 276 aaKnown RBP14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 KLHL29Q96CT2 875 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 FER1L6-AS2Q96M78 137 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 LPAR4Q99677 370 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 EBF4Q9BQW3 602 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 ADAP2Q9NPF8 381 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 FGFR1OP2Q9NVK5 253 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 FAM53CQ9NYF3 392 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 UTS2RQ9UKP6 389 aa14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 EIF3LQ9Y262 564 aaKnown RBP14.48□□□□□ -0.09
RPUSD3-217ENST00000485705 VIMP08670 466 aaKnown RBP14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 PRPS2P11908 318 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 STT3AP46977 705 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 CCL11P51671 97 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 AQP5P55064 265 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 LSM12Q3MHD2 195 aaKnown RBP14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 ZNF385BQ569K4 471 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 TMEM198Q66K66 360 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 OGFOD2Q6N063 350 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 BORAQ6PGQ7 559 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 IKBIPQ70UQ0 350 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 LRRC34Q8IZ02 419 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 KRTCAP2Q8N6L1 136 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 NFAM1Q8NET5 270 aaPredicted RBP14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 ACTRT2Q8TDY3 377 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 PTPMT1Q8WUK0 201 aaPredicted RBP14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 APOBEC4Q8WW27 367 aaKnown RBP14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 CNRIP1Q96F85 164 aaPredicted RBP14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 VPS50Q96JG6 964 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 MARK4Q96L34 752 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 ZNF681Q96N22 645 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 DGAT2Q96PD7 388 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 TUBB6Q9BUF5 446 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 NPHS2Q9NP85 383 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 ATP13A2Q9NQ11 1180 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 ASIC5Q9NY37 505 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 NOP53Q9NZM5 478 aaKnown RBP14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 DCTN4Q9UJW0 460 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 WBP11Q9Y2W2 641 aaKnown RBP14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 ZFYVE26Q68DK2 2539 aa14.47□□□□□ -0.09
RPUSD3-217ENST00000485705 SAGE2PA6NJ88 616 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 A6NL46 340 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 GABRR3A8MPY1 467 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 C17orf105B2RV13 164 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 HRKO00198 91 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 POLR3GO15318 223 aaPredicted RBP14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 TGDSO95455 350 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 SLC35E2P0CK97 266 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 CPMP14384 443 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 TNNI3P19429 210 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 ASMTP46597 345 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 RRADP55042 308 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 SLC26A5P58743 744 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 SF3A3Q12874 501 aaKnown RBP eCLIP14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 MAD2L1Q13257 205 aaPredicted RBP14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 RAPSNQ13702 412 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 ELAVL1Q15717 326 aaKnown RBP14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 BTBD16Q32M84 506 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 LINC00303Q3SY05 128 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 CGB2Q6NT52 195 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 APLFQ8IW19 511 aaPredicted RBP14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 ST13P4Q8IZP2 240 aaPredicted RBP14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 CLEC1AQ8NC01 280 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 TTC9Q92623 222 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 ZNF317Q96PQ6 595 aaPredicted RBP14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 REEP4Q9H6H4 257 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 MIEF1Q9NQG6 463 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 SLC35C2Q9NQQ7 365 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 EHD3Q9NZN3 535 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 PSME2Q9UL46 239 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 G3BP2Q9UN86 482 aaKnown RBP14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 NBEAQ8NFP9 2946 aa14.46□□□□□ -0.09
RPUSD3-217ENST00000485705 OR10H2O60403 315 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 ITGB2P05107 769 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 ITGAMP11215 1152 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 PORP16435 677 aaPredicted RBP14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 GPR143P51810 404 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 PLIN5Q00G26 463 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 AIMP2Q13155 320 aaKnown RBP14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 PDE7AQ13946 482 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 LTB4RQ15722 352 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 MPEG1Q2M385 716 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 PLAG1Q6DJT9 500 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 SPATA19Q7Z5L4 167 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 CCDC116Q8IYX3 515 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 KIF2BQ8N4N8 673 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 ZNF321PQ8N8H1 164 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 OR7A2PQ8NGA2 310 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 CEP70Q8NHQ1 597 aa14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 CIDECQ96AQ7 238 aaPredicted RBP14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 RBM18Q96H35 190 aaKnown RBP14.45□□□□□ -0.1
RPUSD3-217ENST00000485705 THOC3Q96J01 351 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms