RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 NT5DC2Q9H857 520 aa18.7■□□□□ 0.58
LIMS2-215ENST00000484252 C11orf16Q9NQ32 467 aa18.7■□□□□ 0.58
LIMS2-215ENST00000484252 DYRK4Q9NR20 520 aa18.7■□□□□ 0.58
LIMS2-215ENST00000484252 QPCTLQ9NXS2 382 aa18.7■□□□□ 0.58
LIMS2-215ENST00000484252 RPL36Q9Y3U8 105 aaKnown RBP18.7■□□□□ 0.58
LIMS2-215ENST00000484252 MTCL1Q9Y4B5 1905 aaKnown RBP18.69■□□□□ 0.58
LIMS2-215ENST00000484252 EDDM13A0A1B0GTR0 161 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 PDZK1P1A8MUH7 402 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 SLITRK5O94991 958 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 ADRB3P13945 408 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 TIE1P35590 1138 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 TPTEP56180 551 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 RPS26P62854 115 aaKnown RBP18.69■□□□□ 0.58
LIMS2-215ENST00000484252 PLPP4Q5VZY2 271 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 CASP12Q6UXS9 341 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 ZBED6CLQ96FA7 236 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-215ENST00000484252 ACAD8Q9UKU7 415 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 PLAGL1Q9UM63 463 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 LSM2Q9Y333 95 aaKnown RBP18.69■□□□□ 0.58
LIMS2-215ENST00000484252 HCFC2Q9Y5Z7 792 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 OR10H3O60404 316 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 KCNK2O95069 426 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 TBX6O95947 436 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-215ENST00000484252 ADH1CP00326 375 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 APOA1P02647 267 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 CCR8P51685 355 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 C9orf64Q5T6V5 341 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 OR8J1Q8NGP2 316 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 TFGQ92734 400 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-215ENST00000484252 CEP19Q96LK0 163 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 F2RL3Q96RI0 385 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 IL4I1Q96RQ9 567 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 MND1Q9BWT6 205 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 SIRT3Q9NTG7 399 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-215ENST00000484252 ACSS1Q9NUB1 689 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-215ENST00000484252 EHD3Q9NZN3 535 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 SEC14L4Q9UDX3 406 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 ADAM29Q9UKF5 820 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 TRAPPC4Q9Y296 219 aa18.69■□□□□ 0.58
LIMS2-215ENST00000484252 FAM227AF5H4B4 570 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 TPD52L2O43399 206 aaKnown RBP18.68■□□□□ 0.58
LIMS2-215ENST00000484252 GPX5O75715 221 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 TIMP1P01033 207 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 XKP51811 444 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 NTHL1P78549 312 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 REEP5Q00765 189 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 ALDH6A1Q02252 535 aaKnown RBP18.68■□□□□ 0.58
LIMS2-215ENST00000484252 MLC1Q15049 377 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 SEC23BQ15437 767 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 HNRNPA1L2Q32P51 320 aaKnown RBP18.68■□□□□ 0.58
LIMS2-215ENST00000484252 LEXMQ3ZCV2 418 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 FNDC3BQ53EP0 1204 aaKnown RBP18.68■□□□□ 0.58
LIMS2-215ENST00000484252 AMZ2Q86W34 360 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 NUDT13Q86X67 352 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 ST13P5Q8NFI4 369 aaPredicted RBP18.68■□□□□ 0.58
LIMS2-215ENST00000484252 ACAT2Q9BWD1 397 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 SEMA3GQ9NS98 782 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 TAC3Q9UHF0 121 aa18.68■□□□□ 0.58
LIMS2-215ENST00000484252 HMGN4O00479 90 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 KIAA0355O15063 1070 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 HNRNPA1P09651 372 aaKnown RBP eCLIP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 VEGFBP49765 207 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 ELAVL3Q14576 367 aaKnown RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 OCLNQ16625 522 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 ATAD3BQ5T9A4 648 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 PGBD2Q6P3X8 592 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 ERN2Q76MJ5 926 aaKnown RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 MMAAQ8IVH4 418 aaKnown RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 C2orf73Q8N5S3 287 aaPredicted RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 ANKRD53Q8N9V6 530 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 GALNT6Q8NCL4 622 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 SLC30A2Q9BRI3 323 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 FUZQ9BT04 418 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 NDEL1Q9GZM8 345 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 POLR2J3Q9H1A7 115 aaKnown RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 HHATLQ9HCP6 504 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 ZSCAN32Q9NX65 697 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 P2RX2Q9UBL9 471 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 ANHXE9PGG2 379 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 H3BN98 237 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 RTCAO00442 366 aaKnown RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 ASNA1O43681 348 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 HTRA4P83105 476 aaPredicted RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 FOXD4Q12950 439 aaPredicted RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 HSPB3Q12988 150 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 SPHARQ15513 63 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 C6orf183Q5T699 404 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 MFSD4BQ5TF39 518 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 DESI1Q6ICB0 168 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 FAM180BQ6P0A1 224 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 DEF8Q6ZN54 512 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 C12orf40Q86WS4 652 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 LINC00471Q8N535 108 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 CELF5Q8N6W0 485 aaKnown RBP18.67■□□□□ 0.58
LIMS2-215ENST00000484252 OR5K2Q8NHB8 316 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 RAB8BQ92930 207 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 RGMAQ96B86 450 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 ASPNQ9BXN1 380 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 SEC14L3Q9UDX4 400 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms