RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 KBTBD12Q3ZCT8 623 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 FASTKD1Q53R41 847 aaKnown RBP10.68□□□□□ -0.7
USP11-208ENST00000480104 ATG4DQ86TL0 474 aaPredicted RBP10.68□□□□□ -0.7
USP11-208ENST00000480104 C17orf64Q86WR6 236 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 DND1Q8IYX4 353 aaKnown RBP10.68□□□□□ -0.7
USP11-208ENST00000480104 SLC15A4Q8N697 577 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 NUBPLQ8TB37 319 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 NT5CQ8TCD5 201 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 MRPL24Q96A35 216 aaKnown RBP10.68□□□□□ -0.7
USP11-208ENST00000480104 BTBD9Q96Q07 612 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 TACO1Q9BSH4 297 aaKnown RBP10.68□□□□□ -0.7
USP11-208ENST00000480104 SOX7Q9BT81 388 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 TRIM2Q9C040 744 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 METTL17Q9H7H0 456 aaPredicted RBP10.68□□□□□ -0.7
USP11-208ENST00000480104 COPS7AQ9UBW8 275 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 TMEFF2Q9UIK5 374 aaPredicted RBP10.68□□□□□ -0.7
USP11-208ENST00000480104 AMFRQ9UKV5 643 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 RNF112Q9ULX5 631 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 PROCRQ9UNN8 238 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 CTAGE15A4D2H0 777 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 SLC22A20A6NK97 555 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 ABCB7O75027 752 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 SNX4O95219 450 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 ETHE1O95571 254 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 CSF3P09919 207 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 CTNNA2P26232 953 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 ZFP36P26651 326 aaKnown RBP10.67□□□□□ -0.7
USP11-208ENST00000480104 MSH2P43246 934 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 LHX2P50458 406 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 NTRK2Q16620 822 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 ODF2Q5BJF6 829 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 AARS2Q5JTZ9 985 aaKnown RBP10.67□□□□□ -0.7
USP11-208ENST00000480104 CTSL3PQ5NE16 218 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 NCMAPQ5T1S8 102 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 RINLQ6ZS11 566 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 CTAGE6Q86UF2 777 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 PACS2Q86VP3 889 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 TRIM42Q8IWZ5 723 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 NUP43Q8NFH3 380 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 ZNF721Q8TF20 911 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 ZNF418Q8TF45 676 aaPredicted RBP10.67□□□□□ -0.7
USP11-208ENST00000480104 LRRC45Q96CN5 670 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 KLHL31Q9H511 634 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 FAIMQ9NVQ4 179 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 TEX10Q9NXF1 929 aaPredicted RBP10.67□□□□□ -0.7
USP11-208ENST00000480104 DLGAP4Q9Y2H0 992 aa10.67□□□□□ -0.7
USP11-208ENST00000480104 RYR2Q92736 4967 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 VWC2LB2RUY7 222 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 H7C0C1 242 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 GNB5O14775 395 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 NIPSNAP2O75323 286 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 FESP07332 822 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 PYGBP11216 843 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 TNNI3P19429 210 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 ATP5OP48047 213 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 RUNX2Q13950 521 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 RAB35Q15286 201 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 KLHDC8BQ8IXV7 354 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 PYCR2Q96C36 320 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 CISD1Q9NZ45 108 aaKnown RBP10.66□□□□□ -0.7
USP11-208ENST00000480104 MOCS1Q9NZB8 636 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 VTI1BQ9UEU0 232 aa10.66□□□□□ -0.7
USP11-208ENST00000480104 CDC7O00311 574 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 LY6HO94772 140 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 SMIM10L1P0DMW3 83 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 ARAFP10398 606 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 TNNT1P13805 278 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 SKIV2L2P42285 1042 aaKnown RBP10.65□□□□□ -0.7
USP11-208ENST00000480104 NR4A2P43354 598 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 TTPAP49638 278 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 CLDN18P56856 261 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 FBXW4P57775 412 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 HILS1P60008 231 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 BTN3A2P78410 334 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 RPS6KA2Q15349 733 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 AGAP6Q5VW22 663 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 TIGD3Q6B0B8 471 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 C11orf71Q6IPW1 123 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 TMEM64Q6YI46 380 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 CILP2Q8IUL8 1156 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 SPNS2Q8IVW8 549 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 REXO1L1PQ8IX06 675 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 ZNF595Q8IYB9 648 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 OR14L1PQ8NHC6 308 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 FIG4Q92562 907 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 SMIM10Q96HG1 83 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 TMEM41AQ96HV5 264 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 ZNF778Q96MU6 729 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 PPP1R2P1Q96PQ5 205 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 GAL3ST4Q96RP7 486 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 CSF3RQ99062 836 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 ALOXE3Q9BYJ1 711 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 AICDAQ9GZX7 198 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 PCBD2Q9H0N5 130 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 CATSPERZQ9NTU4 200 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 ARL15Q9NXU5 204 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 UVRAGQ9P2Y5 699 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 GALPQ9UBC7 116 aa10.65□□□□□ -0.7
USP11-208ENST00000480104 LIMA1Q9UHB6 759 aaKnown RBP10.65□□□□□ -0.7
USP11-208ENST00000480104 A0A0G2JN53 185 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms