RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ABI3Q9P2A4 366 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GMPR2Q9P2T1 348 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 FBXW2Q9UKT8 454 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 SETD1AO15047 1707 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ITSN1Q15811 1721 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 EDDM13A0A1B0GTR0 161 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 MEIOCA2RUB1 952 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CLIC3O95833 236 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TP53P04637 393 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CDK1P06493 297 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 OXA1LQ15070 435 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 HMGN3Q15651 99 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 OCLNQ16625 522 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 MAP1SQ66K74 1059 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 KIAA1324Q6UXG2 1013 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 JAGN1Q8N5M9 183 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 YIPF7Q8N8F6 280 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 OR51G2Q8NGK0 314 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 LRRN4Q8WUT4 740 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ARNTL2Q8WYA1 636 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TCEAL3Q969E4 200 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TMEM203Q969S6 136 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 UHRF1Q96T88 793 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PHB2Q99623 299 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GSX2Q9BZM3 304 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 LHPPQ9H008 270 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TNKS2Q9H2K2 1166 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TP63Q9H3D4 680 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GSTO2Q9H4Y5 243 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 B4GALT6Q9UBX8 382 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF69Q9UC07 566 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 UTS2RQ9UKP6 389 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ARHGEF28Q8N1W1 1705 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF726A6NNF4 738 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ARVCFO00192 962 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 RNASET2O00584 256 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 NRP1O14786 923 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 POLR1CO15160 346 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 DDNO94850 711 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 JUNP05412 331 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 HLA-EP13747 358 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CERS1P27544 350 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 MLLT3P42568 568 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PUM1Q14671 1186 aaKnown RBP eCLIP5.89□□□□□ -1.476e-6■■□□□ 13.1
PRPF4B-205ENST00000480058 EXOC3L2Q2M3D2 409 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 TOR1AIP1Q5JTV8 583 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 SHFQ7M4L6 423 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CEACAM19Q7Z692 300 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ARHGAP12Q8IWW6 846 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 WDTC1Q8N5D0 677 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 SLC5A8Q8N695 610 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CLDN19Q8N6F1 224 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ACOT11Q8WXI4 607 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF689Q96CS4 500 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 UBXN10Q96LJ8 280 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 OR51J1Q9H342 316 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 METTL8Q9H825 291 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ACSS1Q9NUB1 689 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ABCB8Q9NUT2 735 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 EBF1Q9UH73 591 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CYB5R1Q9UHQ9 305 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ACSL6Q9UKU0 697 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 N6AMT1Q9Y5N5 214 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GPR45Q9Y5Y3 372 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 LTBP3Q9NS15 1303 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 A8MX80 341 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GPR89AB7ZAQ6 455 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 SYT5O00445 386 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 OR7A10O76100 309 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 SNAPINO95295 136 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CXCL14O95715 111 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 EPHX1P07099 455 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GPR89BP0CG08 455 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GTF2F2P13984 249 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CDK2P24941 298 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CD6P30203 668 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PKLRP30613 574 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CPOXP36551 454 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 EIF2S3P41091 472 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 PSMD8P48556 350 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 MASP1P48740 699 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 HERV-K104P61576 105 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GGTA1PQ4G0N0 100 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 SMARCD3Q6STE5 483 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF704Q6ZNC4 412 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CIR1Q86X95 450 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 UBE2J2Q8N2K1 259 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 OR2L5Q8NG80 312 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 GLYATL1Q969I3 302 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 FUBP1Q96AE4 644 aaKnown RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 YIPF4Q9BSR8 244 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 CHIAQ9BZP6 476 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF334Q9HCZ1 680 aaPredicted RBP5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 OLAHQ9NV23 265 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 SLC2A6Q9UGQ3 507 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 ADAM29Q9UKF5 820 aa5.89□□□□□ -1.47
PRPF4B-205ENST00000480058 NDUFB2O95178 105 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 CYP17A1P05093 508 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ACPPP15309 386 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 GM2AP17900 193 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms