RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ACTR8Q9H981 624 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 EML4Q9HC35 981 aaKnown RBP5.88□□□□□ -1.47
SF3B1-209ENST00000479532 FBXO8Q9NRD0 319 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 THSD1Q9NS62 852 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 FGF21Q9NSA1 209 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 NMRK1Q9NWW6 199 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 KLHL14Q9P2G3 628 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 PISDQ9UG56 409 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ANGPTL2Q9UKU9 493 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 AP1M2Q9Y6Q5 423 aa5.88□□□□□ -1.47
SF3B1-209ENST00000479532 ADAMTS20P59510 1910 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TRBC2A0A5B9 178 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TMEM120BA0PK00 339 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 OR2A25A4D2G3 310 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 ANKDD1BA6NHY2 528 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TMEM150CB9EJG8 249 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF701M0R085 212 aaPredicted RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 E2F3O00716 465 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 CASC3O15234 703 aaKnown RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 OR1F1O43749 312 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TYROBPO43914 113 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SCRG1O75711 98 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 OR2B3O76000 313 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TNFSF15O95150 251 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SIX3O95343 332 aaPredicted RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 CLDN9O95484 217 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 LYNP07948 512 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 RPS17P08708 135 aaKnown RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SLC35G6P0C7Q6 338 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 FOLR1P15328 257 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 S100A5P33763 92 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SERPINB5P36952 375 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 HNF4AP41235 474 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 ARSFP54793 590 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 VSX2P58304 361 aaPredicted RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SKP1P63208 163 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 CSNK1G2P78368 415 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 REEP5Q00765 189 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 RGS1Q08116 209 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 CHIT1Q13231 466 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TUBA3CQ13748 450 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 RCN2Q14257 317 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 KCNAB1Q14722 419 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 GRM7Q14831 915 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TBCCQ15814 346 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 FAM214AQ32MH5 1076 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 C18orf21Q32NC0 220 aaPredicted RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 FBXO48Q5FWF7 155 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF678Q5SXM1 525 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 C10orf62Q5T681 223 aaPredicted RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 LIPJQ5W064 366 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 FCRL6Q6DN72 434 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 GRHL2Q6ISB3 625 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF425Q6IV72 752 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 NIPAL1Q6NVV3 410 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 MED27Q6P2C8 311 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 RPTNQ6XPR3 784 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 GOLGA7Q7Z5G4 137 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 NET1Q7Z628 596 aaPredicted RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 PATL1Q86TB9 770 aaKnown RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 PAQR7Q86WK9 346 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TMEM126BQ8IUX1 230 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 NUDCD3Q8IVD9 361 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 WDR75Q8IWA0 830 aaKnown RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 DNAJC22Q8N4W6 341 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 CAMKVQ8NCB2 501 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TRPV3Q8NET8 790 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 ESAMQ96AP7 390 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 CLIP3Q96DZ5 547 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 C16orf92Q96LL3 132 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 PPM1MQ96MI6 270 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 BTBD9Q96Q07 612 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 OR4K3Q96R72 315 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 CCT7Q99832 543 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SIKE1Q9BRV8 207 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 NDC1Q9BTX1 674 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 TRMOQ9BU70 441 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SCNM1Q9BWG6 230 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 OSBPL10Q9BXB5 764 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 C1QTNF3Q9BXJ4 246 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 NT5DC2Q9H857 520 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 NOL11Q9H8H0 719 aaKnown RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SEMA4BQ9NPR2 832 aaPredicted RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 INTS9Q9NV88 658 aaKnown RBP5.87□□□□□ -1.47
SF3B1-209ENST00000479532 OCIAD1Q9NX40 245 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SLC17A7Q9P2U7 560 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 PCTPQ9UKL6 214 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 EMCNQ9ULC0 261 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SNX6Q9UNH7 406 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 KLHL20Q9Y2M5 609 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 USH1CQ9Y6N9 552 aa5.87□□□□□ -1.47
SF3B1-209ENST00000479532 SNRNP200O75643 2136 aaKnown RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 HEATR5BQ9P2D3 2071 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 KCNE1BA0A087WTH5 132 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 FEZF1A0PJY2 475 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 G3V2L1 256 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 HAT1O14929 419 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 CHEK2O96017 543 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 SERPIND1P05546 499 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ENO1P06733 434 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms