RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZSWIM3Q96MP5 696 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 IL17FQ96PD4 163 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 SIRT3Q9NTG7 399 aaPredicted RBP23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 TAS2R7Q9NYW3 318 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 HTR3EA5X5Y0 456 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 HMGN4O00479 90 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 GPX5O75715 221 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 TIMP1P01033 207 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 XKP51811 444 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 HTRA4P83105 476 aaPredicted RBP23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 COX10Q12887 443 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 SEC23BQ15437 767 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 SPDYE7PQ495Y7 208 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 AMZ2Q86W34 360 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 NUDT13Q86X67 352 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 OR5AR1Q8NGP9 310 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 TFGQ92734 400 aaPredicted RBP23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 SLC30A2Q9BRI3 323 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 HHATLQ9HCP6 504 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 C11orf16Q9NQ32 467 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 EHD3Q9NZN3 535 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 HIDE1A8MVS5 230 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 OR10H3O60404 316 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 GTF2E2P29084 291 aaKnown RBP23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 ELAVL3Q14576 367 aaKnown RBP23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 MFSD4BQ5TF39 518 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 PGBD2Q6P3X8 592 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 ADAMTSL4Q6UY14 1074 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 PROKR2Q8NFJ6 384 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 SETD6Q8TBK2 473 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 COX14Q96I36 57 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 CEP19Q96LK0 163 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 POLR2J3Q9H1A7 115 aaKnown RBP23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 NPAP1Q9NZP6 1156 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 KLHL3Q9UH77 587 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 ASNA1O43681 348 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 SH3BP5O60239 455 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 METAP1P53582 386 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 RPS26P62854 115 aaKnown RBP23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 SPHARQ15513 63 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 ATAD3BQ5T9A4 648 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 OR5K2Q8NHB8 316 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 RGMAQ96B86 450 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 F2RL3Q96RI0 385 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 IL4I1Q96RQ9 567 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 SEMA3GQ9NS98 782 aa23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 DNMT3AQ9Y6K1 912 aaPredicted RBP23.36■■□□□ 1.33
SYNGAP1-206ENST00000479510 A0A1W2PRQ8 180 aa23.35■■□□□ 1.33
SYNGAP1-206ENST00000479510 PSMA1P25786 263 aaKnown RBP23.35■■□□□ 1.33
SYNGAP1-206ENST00000479510 COPZ1P61923 177 aa23.35■■□□□ 1.33
SYNGAP1-206ENST00000479510 BCL2A1Q16548 175 aa23.35■■□□□ 1.33
SYNGAP1-206ENST00000479510 CELF5Q8N6W0 485 aaKnown RBP23.35■■□□□ 1.33
SYNGAP1-206ENST00000479510 ANKRD53Q8N9V6 530 aa23.35■■□□□ 1.33
SYNGAP1-206ENST00000479510 P2RX2Q9UBL9 471 aa23.35■■□□□ 1.33
SYNGAP1-206ENST00000479510 TAC3Q9UHF0 121 aa23.35■■□□□ 1.33
SYNGAP1-206ENST00000479510 HCFC2Q9Y5Z7 792 aa23.35■■□□□ 1.33
SYNGAP1-206ENST00000479510 KMOO15229 486 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 SEMA7AO75326 666 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 KCNJ8Q15842 424 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 FNDC3BQ53EP0 1204 aaKnown RBP23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 DESI1Q6ICB0 168 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 KIAA1211LQ6NV74 962 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 FAM26EQ8N5C1 309 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 NANOGP1Q8N7R0 232 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 OR9Q1Q8NGQ5 310 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 ASPNQ9BXN1 380 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 MOV10Q9HCE1 1003 aaKnown RBP23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 SMURF1Q9HCE7 757 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 NDUFB11Q9NX14 153 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 SEC14L3Q9UDX4 400 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 STUB1Q9UNE7 303 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 LRRK1Q38SD2 2015 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 ANHXE9PGG2 379 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 FAM227AF5H4B4 570 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 DYRK3O43781 588 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 COQ9O75208 318 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 CCT3P49368 545 aaKnown RBP23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 MLLT11Q13015 90 aaPredicted RBP23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 LEXMQ3ZCV2 418 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 PLPP4Q5VZY2 271 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 CCBE1Q6UXH8 406 aaPredicted RBP23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 GDPD3Q7L5L3 318 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 TMCO6Q96DC7 493 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 POLDIP3Q9BY77 421 aaKnown RBP23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 PLAGL1Q9UM63 463 aa23.34■■□□□ 1.33
SYNGAP1-206ENST00000479510 DRD2P14416 443 aa23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 ZNF91Q05481 1191 aa23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 C1DQ13901 141 aaKnown RBP23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 C12orf40Q86WS4 652 aa23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 ETFBKMTQ8IXQ9 262 aa23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 TBC1D19Q8N5T2 526 aa23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 WDFY2Q96P53 400 aa23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 TREX2Q9BQ50 279 aaPredicted RBP23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 SPATA5L1Q9BVQ7 753 aa23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 ACAT2Q9BWD1 397 aa23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 CRISPLD2Q9H0B8 497 aa23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 DDX31Q9H8H2 851 aaKnown RBP23.33■■□□□ 1.33
SYNGAP1-206ENST00000479510 NOTCH4Q99466 2003 aa23.33■■□□□ 1.32
SYNGAP1-206ENST00000479510 SLC35F4A4IF30 521 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms