RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 DNAJB8Q8NHS0 232 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 SLC2A12Q8TD20 617 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 ZNF721Q8TF20 911 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 SREK1Q8WXA9 508 aaKnown RBP12.5□□□□□ -0.41
ACTN4-205ENST00000477174 RIT1Q92963 219 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 PPWD1Q96BP3 646 aaKnown RBP12.5□□□□□ -0.41
ACTN4-205ENST00000477174 TM4SF18Q96CE8 201 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 ART5Q96L15 291 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 FAM111AQ96PZ2 611 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 KCNA7Q96RP8 456 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 FAIM2Q9BWQ8 316 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 GATA5Q9BWX5 397 aaPredicted RBP12.5□□□□□ -0.41
ACTN4-205ENST00000477174 SIRT5Q9NXA8 310 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 TEX10Q9NXF1 929 aaPredicted RBP12.5□□□□□ -0.41
ACTN4-205ENST00000477174 LRFN1Q9P244 771 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 SLC17A7Q9P2U7 560 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 MYOTQ9UBF9 498 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 COPS7AQ9UBW8 275 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 MCM8Q9UJA3 840 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 PCDHA9Q9Y5H5 950 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 TMEM200CA6NKL6 621 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 CTIFO43310 598 aaKnown RBP12.49□□□□□ -0.41
ACTN4-205ENST00000477174 OR10H2O60403 315 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 NPHS1O60500 1241 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 ERLIN1O75477 346 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 PRKRAO75569 313 aaKnown RBP12.49□□□□□ -0.41
ACTN4-205ENST00000477174 ITGA10O75578 1167 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 NEURL1O76050 574 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 RASAL1O95294 804 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 CBX6O95503 412 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 IGKV3-11P04433 115 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 ALDH3A1P30838 453 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 SERPINB5P36952 375 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 GSTM5P46439 218 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 HTR6P50406 440 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 XKP51811 444 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 RNF4P78317 190 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 HMGCS1Q01581 520 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 CEP85LQ5SZL2 805 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 SPINK14Q6IE38 97 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 SLC25A25Q6KCM7 469 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 SLC48A1Q6P1K1 146 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 LRIG3Q6UXM1 1119 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 FAM76AQ8TAV0 307 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 THAP3Q8WTV1 239 aaPredicted RBP12.49□□□□□ -0.41
ACTN4-205ENST00000477174 UCN3Q969E3 161 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 C11orf24Q96F05 449 aaPredicted RBP12.49□□□□□ -0.41
ACTN4-205ENST00000477174 PGM2Q96G03 612 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 SCMH1Q96GD3 660 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 FBXL20Q96IG2 436 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 METTL2AQ96IZ6 378 aaKnown RBP12.49□□□□□ -0.41
ACTN4-205ENST00000477174 C5orf34Q96MH7 638 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 SIGLEC12Q96PQ1 595 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 EML4Q9HC35 981 aaKnown RBP12.49□□□□□ -0.41
ACTN4-205ENST00000477174 SSU72Q9NP77 194 aaKnown RBP12.49□□□□□ -0.41
ACTN4-205ENST00000477174 RRAGDQ9NQL2 400 aaPredicted RBP12.49□□□□□ -0.41
ACTN4-205ENST00000477174 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
ACTN4-205ENST00000477174 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■□□□□ 8.3
ACTN4-205ENST00000477174 ANKRD10Q9NXR5 420 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 CES1P1Q9UKY3 287 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 NTNG1Q9Y2I2 539 aa12.49□□□□□ -0.41
ACTN4-205ENST00000477174 CRYABP02511 175 aaKnown RBP12.48□□□□□ -0.41
ACTN4-205ENST00000477174 SP1P08047 785 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 FGF4P08620 206 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 DRD2P14416 443 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 CREB1P16220 341 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 PORP16435 677 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-205ENST00000477174 GNLYP22749 145 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 SERPINB3P29508 390 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 DEKP35659 375 aaKnown RBP12.48□□□□□ -0.41
ACTN4-205ENST00000477174 SSR4P51571 173 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 ZNF267Q14586 743 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-205ENST00000477174 SPRED3Q2MJR0 410 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 SPDYAQ5MJ70 313 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 ZNF468Q5VIY5 522 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-205ENST00000477174 ZNF324BQ6AW86 544 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-205ENST00000477174 SCIMPQ6UWF3 145 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 DGAT2L6Q6ZPD8 337 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 EXOC3L1Q86VI1 746 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 GPALPP1Q8IXQ4 340 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 TMEM156Q8N614 296 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 ZNF321PQ8N8H1 164 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 TMEM178AQ8NBL3 297 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 TMEM125Q96AQ2 219 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 APIPQ96GX9 242 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 ZIM3Q96PE6 472 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 TAAR6Q96RI8 345 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 TNFRSF12AQ9NP84 129 aa12.48□□□□□ -0.41
ACTN4-205ENST00000477174 WBP11Q9Y2W2 641 aaKnown RBP12.48□□□□□ -0.41
ACTN4-205ENST00000477174 RELNP78509 3460 aa12.47□□□□□ -0.41
ACTN4-205ENST00000477174 GNG14A0A1W2PPG7 69 aa12.47□□□□□ -0.41
ACTN4-205ENST00000477174 GOLGA6L10A6NI86 522 aa12.47□□□□□ -0.41
ACTN4-205ENST00000477174 NPIPB8E9PQR5 432 aa12.47□□□□□ -0.41
ACTN4-205ENST00000477174 SLC28A1O00337 649 aa12.47□□□□□ -0.41
ACTN4-205ENST00000477174 AZIN1O14977 448 aa12.47□□□□□ -0.41
ACTN4-205ENST00000477174 PCDH7O60245 1069 aa12.47□□□□□ -0.41
ACTN4-205ENST00000477174 PRKNO60260 465 aaPredicted RBP12.47□□□□□ -0.41
ACTN4-205ENST00000477174 SLC25A12O75746 678 aa12.47□□□□□ -0.41
ACTN4-205ENST00000477174 OR2J2O76002 312 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms