RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ZNF709Q8N972 641 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 OR2T33Q8NG76 320 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 MARCH4Q9P2E8 410 aaPredicted RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 PRODH2Q9UF12 536 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 FAM208AQ9UK61 1670 aaKnown RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 NALCNQ8IZF0 1738 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 A6NCN8 305 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 PRSS56P0CW18 603 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 MAPK3P27361 379 aaPredicted RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 SOX4Q06945 474 aaPredicted RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 CRYZQ08257 329 aaKnown RBP10.51□□□□□ -0.73
VAPB-204ENST00000475243 PLCXD2Q0VAA5 305 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 KCNC3Q14003 757 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 MPP2Q14168 576 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 NFE2L1Q14494 772 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 PSAPL1Q6NUJ1 521 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 CEACAM19Q7Z692 300 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 ZSWIM9Q86XI8 627 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 SIAH1Q8IUQ4 282 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 TRAM1L1Q8N609 369 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 OR4C15Q8NGM1 316 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 CD300LFQ8TDQ1 290 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 WDR92Q96MX6 357 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 PITX2Q99697 317 aa10.51□□□□□ -0.73
VAPB-204ENST00000475243 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 A0A1B0GVC2 190 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 SMCO3A2RU48 225 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 MYADML2A6NDP7 307 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 OTOL1A6NHN0 477 aaPredicted RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 ABCB7O75027 752 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 STC2O76061 302 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 AK4P27144 223 aaPredicted RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 RPL26P61254 145 aaKnown RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 SPAG16Q8N0X2 631 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 HUS1BQ8NHY5 278 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 COQ8AQ8NI60 647 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 ZNF382Q96SR6 550 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 TMEM121BQ9BXQ6 578 aaPredicted RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 APOBEC3BQ9UH17 382 aaKnown RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 I3L521 148 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 GPR32O75388 356 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 NPPAP01160 153 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 MAGEA11P43364 429 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 ZNF404Q494X3 552 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 TMEM25Q86YD3 366 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 ZFP41Q8N8Y5 198 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 OR8K5Q8NH50 307 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 EPHA6Q9UF33 1036 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 SCP2D1Q9UJQ7 156 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 PFKMP08237 780 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 PEPDP12955 493 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 CD1DP15813 335 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 ZNF182P17025 639 aaPredicted RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 AFF1P51825 1210 aaKnown RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 ARSFP54793 590 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 MRPL49Q13405 166 aaKnown RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 CES4AQ5XG92 561 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 C3orf33Q6P1S2 294 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 SHQ1Q6PI26 577 aaKnown RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 PACRGLQ8N7B6 248 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 PROKR1Q8TCW9 393 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 OR5P2Q8WZ92 322 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 MAL2Q969L2 176 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 RADILQ96JH8 1075 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 SFXN1Q9H9B4 322 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 RNF186Q9NXI6 227 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 EXTL2Q9UBQ6 330 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 SLC7A11Q9UPY5 501 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 ACTL7AQ9Y615 435 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 CDH10Q9Y6N8 788 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 RFPL1O75677 317 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 EPOP01588 193 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 TFPTP0C1Z6 253 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 FAM163BP0C2L3 166 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 EPCAMP16422 314 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 CHRFAM7AQ494W8 412 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 C6orf183Q5T699 404 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 SLC27A4Q6P1M0 643 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 C6orf120Q7Z4R8 191 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 TSPAN33Q86UF1 283 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 C15orf40Q8WUR7 153 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 MROQ9BYG7 248 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 DHDHQ9UQ10 334 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 TRBV2A0A0J9YWF9 115 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 DUX1O43812 170 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 LCN1P31025 176 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 NSDHLQ15738 373 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 SLC36A3Q495N2 470 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 HSD17B12Q53GQ0 312 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 TECRLQ5HYJ1 363 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 CATSPEREQ5SY80 951 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 C22orf42Q6IC83 251 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 TBC1D15Q8TC07 691 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 SECISBP2Q96T21 854 aaKnown RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 REV1Q9UBZ9 1251 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 TNFRSF1BP20333 461 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 PTGS2P35354 604 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 MAGEA8P43361 318 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 FAM189A2Q15884 450 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 SLC35G1Q2M3R5 365 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms