RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.34□□□□□ -0.43
COPS7B-219ENST00000474042 PRRC2AP48634 2157 aaKnown RBP12.34□□□□□ -0.43
COPS7B-219ENST00000474042 TRGV5A0A0B4J1U4 118 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 UBXN8O00124 270 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 SAP18O00422 153 aaKnown RBP12.33□□□□□ -0.44
COPS7B-219ENST00000474042 PLPP1O14494 284 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 SH3BGRLO75368 114 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 GSTA2P09210 222 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 FREM3P0C091 2139 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 FBXO45P0C2W1 286 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 RFPL3SP0C7P2 107 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 GABRA1P14867 456 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 ALOX15P16050 662 aaPredicted RBP12.33□□□□□ -0.44
COPS7B-219ENST00000474042 PIK3CBP42338 1070 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 ARFIP1P53367 373 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 HNRNPH2P55795 449 aaKnown RBP12.33□□□□□ -0.44
COPS7B-219ENST00000474042 GPX6P59796 221 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 FOLH1Q04609 750 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 BIKQ13323 160 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 KRTAP21-3Q3LHN1 58 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 SLC22A10Q63ZE4 541 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 OR4C11Q6IEV9 310 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 MRM1Q6IN84 353 aaKnown RBP12.33□□□□□ -0.44
COPS7B-219ENST00000474042 CMC1Q7Z7K0 106 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 OR4N5Q8IXE1 308 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 ST13P4Q8IZP2 240 aaPredicted RBP12.33□□□□□ -0.44
COPS7B-219ENST00000474042 STAG3L4Q8TBR4 150 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 NRGNQ92686 78 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 TANKQ92844 425 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 CNPPD1Q9BV87 410 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 ZNF717Q9BY31 904 aaPredicted RBP12.33□□□□□ -0.44
COPS7B-219ENST00000474042 CXXC4Q9H2H0 198 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 LDAHQ9H6V9 325 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 ZFP64Q9NPA5 681 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 IGSF5Q9NSI5 407 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 QPCTLQ9NXS2 382 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 GRHL1Q9NZI5 618 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 OPTCQ9UBM4 332 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 ADGRE2Q9UHX3 823 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 PHF11Q9UIL8 331 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 ACAD8Q9UKU7 415 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 CNOT11Q9UKZ1 510 aaKnown RBP12.33□□□□□ -0.44
COPS7B-219ENST00000474042 BOKQ9UMX3 212 aaPredicted RBP12.33□□□□□ -0.44
COPS7B-219ENST00000474042 PCDHGB3Q9Y5G1 929 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 ITPR3Q14573 2671 aa12.33□□□□□ -0.44
COPS7B-219ENST00000474042 FAM187AA6NFU0 413 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 SUPT3HB4E1H0 165 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 FAM47E-STBD1D6RA91 191 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 DYRK3O43781 588 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 SUPT3HO75486 399 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 PRKRAO75569 313 aaKnown RBP12.32□□□□□ -0.44
COPS7B-219ENST00000474042 ZWINTO95229 277 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 CLPSP04118 112 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 MTHFD2P13995 350 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 SPRP35270 261 aaPredicted RBP12.32□□□□□ -0.44
COPS7B-219ENST00000474042 PAFAH1B1P43034 410 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 GNG11P61952 73 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 HERVK_113P63132 956 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 ERVK-8P63133 956 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
COPS7B-219ENST00000474042 CALCOCO2Q13137 446 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 SLAMF1Q13291 335 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 EBPQ15125 230 aaKnown RBP12.32□□□□□ -0.44
COPS7B-219ENST00000474042 KBTBD12Q3ZCT8 623 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 GRTP1Q5TC63 336 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 PRAMEF20Q5VT98 475 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 C18orf63Q68DL7 685 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 SEM1Q6ZVN7 128 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 GPR180Q86V85 440 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 RELL2Q8NC24 303 aaPredicted RBP12.32□□□□□ -0.44
COPS7B-219ENST00000474042 OR10G3Q8NGC4 313 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 HUS1BQ8NHY5 278 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 NINJ1Q92982 152 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 RGMAQ96B86 450 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 PPWD1Q96BP3 646 aaKnown RBP12.32□□□□□ -0.44
COPS7B-219ENST00000474042 PELOQ9BRX2 385 aaKnown RBP12.32□□□□□ -0.44
COPS7B-219ENST00000474042 ERP44Q9BS26 406 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 ERVK-6Q9BXR3 956 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 WWTR1Q9GZV5 400 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 SLC6A15Q9H2J7 730 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 DPH5Q9H2P9 285 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 NMRAL1Q9HBL8 299 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 ACKR4Q9NPB9 350 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.32□□□□□ -0.44
COPS7B-219ENST00000474042 CNIH4Q9P003 139 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 RNF14Q9UBS8 474 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 B4GALT7Q9UBV7 327 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 ERVK-19Q9WJR5 959 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 NINQ8N4C6 2090 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 AKAP6Q13023 2319 aa12.32□□□□□ -0.44
COPS7B-219ENST00000474042 A0A0A6YYD5 115 aa12.31□□□□□ -0.44
COPS7B-219ENST00000474042 OR6C76A6NM76 312 aa12.31□□□□□ -0.44
COPS7B-219ENST00000474042 CTAG2O75638 210 aa12.31□□□□□ -0.44
COPS7B-219ENST00000474042 FAM155BO75949 473 aa12.31□□□□□ -0.44
COPS7B-219ENST00000474042 LTA4HP09960 611 aaKnown RBP12.31□□□□□ -0.44
COPS7B-219ENST00000474042 EPB42P16452 691 aa12.31□□□□□ -0.44
COPS7B-219ENST00000474042 RAP1GDS1P52306 607 aa12.31□□□□□ -0.44
COPS7B-219ENST00000474042 IST1P53990 364 aa12.31□□□□□ -0.44
COPS7B-219ENST00000474042 SLC37A1P57057 533 aa12.31□□□□□ -0.44
COPS7B-219ENST00000474042 KCNJ2P63252 427 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms