RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CUL1Q13616 776 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 TSTA3Q13630 321 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-208ENST00000469585 GPR18Q14330 331 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 KPNB1Q14974 876 aaKnown RBP5.97□□□□□ -1.45
PTCD3-208ENST00000469585 NR1D2Q14995 579 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 SLMAPQ14BN4 828 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 SEC23BQ15437 767 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 HSP90AA5PQ58FG0 334 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 LGSNQ5TDP6 509 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ANKRD22Q5VYY1 191 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CES3Q6UWW8 571 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 FRA10AC1Q70Z53 315 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 AMIGO1Q86WK6 493 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 KMT5CQ86Y97 462 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 NRROSQ86YC3 692 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 DCUN1D3Q8IWE4 304 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CTAGE3PQ8IX95 158 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ZBTB2Q8N680 514 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CLDN19Q8N6F1 224 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 GPATCH11Q8N954 259 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 SIDT2Q8NBJ9 832 aaKnown RBP5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ZNF248Q8NDW4 579 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 FBXO36Q8NEA4 188 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 OR5K2Q8NHB8 316 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 MCOLN3Q8TDD5 553 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 IFT81Q8WYA0 676 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 KCNJ9Q92806 393 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 FGF11Q92914 225 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 RAD51AP1Q96B01 352 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CERS2Q96G23 380 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ATXN7L3BQ96GX2 97 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 TGM7Q96PF1 710 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 HGH1Q9BTY7 390 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 NUAK2Q9H093 628 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 RDH14Q9HBH5 336 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 SYTL2Q9HCH5 934 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 SLC40A1Q9NP59 571 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 TREX1Q9NSU2 369 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 HRASLS2Q9NWW9 162 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 SLC39A1Q9NY26 324 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 OR6C2Q9NZP2 312 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 EPHA6Q9UF33 1036 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 PISDQ9UG56 409 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.97□□□□□ -1.45
PTCD3-208ENST00000469585 FBXO5Q9UKT4 447 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 SATB2Q9UPW6 733 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 LOXL2Q9Y4K0 774 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 HEMK1Q9Y5R4 338 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ZNF292O60281 2723 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 PCNX2A6NKB5 2137 aa5.96□□□□□ -1.45
PTCD3-208ENST00000469585 ARHGEF17Q96PE2 2063 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 TCRBV7S3A2A0A539 114 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 OR6C74A6NCV1 312 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 TLCD2A6NGC4 264 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 EIF4E1BA6NMX2 242 aaKnown RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 EFCAB7A8K855 629 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 A8MU76 341 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 GOLGA8KD6RF30 607 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 STMND1H3BQB6 276 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 GOLGA8TH3BQL2 631 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 EIF3FO00303 357 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 NTN3O00634 580 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 GAPDHSO14556 408 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 RRHO14718 337 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 OR1I1O60431 355 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 ZBTB11O95625 1053 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 ALDOAP04075 364 aaKnown RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 ERVK-10P10266 1014 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 SAT1P21673 171 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 CD1CP29017 333 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 ATP5DP30049 168 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 SPRP35270 261 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 SLC1A2P43004 574 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 ABCG1P45844 678 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 RPL21P46778 160 aaKnown RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 KPNA2P52292 529 aaKnown RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 SLC37A1P57057 533 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 TYSND1Q2T9J0 566 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 NKAIN2Q5VXU1 208 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 FAM45BPQ6NSW5 357 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 KLC3Q6P597 504 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF782Q6ZMW2 699 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 C3orf62Q6ZUJ4 267 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 CCDC91Q7Z6B0 441 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 TMEM135Q86UB9 458 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 SLC26A11Q86WA9 606 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF547Q8IVP9 402 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 PIANPQ8IYJ0 282 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 EXD3Q8N9H8 876 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 SRFBP1Q8NEF9 429 aaKnown RBP5.96□□□□□ -1.46
PTCD3-208ENST00000469585 OR4E2Q8NGC2 313 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 OR8K5Q8NH50 307 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 FAM45AQ8TCE6 357 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 KCNE4Q8WWG9 221 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 PATE1Q8WXA2 126 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 ATL1Q8WXF7 558 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 DPF1Q92782 380 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 INPP5DQ92835 1189 aa5.96□□□□□ -1.46
PTCD3-208ENST00000469585 ZG16BQ96DA0 208 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms