RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 LOC105371242A0A075B767 164 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 IGHV3-38A0A0C4DH36 116 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 A0A0U1RRA0 63 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 A0A1B0GU03 582 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 CFAP73A6NFT4 308 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 ERI2A8K979 691 aaKnown RBP4.24□□□□□ -1.73
LSM5-209ENST00000468872 INPP4BO15327 924 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 CSO75390 466 aaKnown RBP4.24□□□□□ -1.73
LSM5-209ENST00000468872 TBX6O95947 436 aaPredicted RBP4.24□□□□□ -1.73
LSM5-209ENST00000468872 PGK2P07205 417 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 SERPINF2P08697 491 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 NDST2P52849 883 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 LIMK2P53671 638 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 CCZ1BP86790 482 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 CCZ1P86791 482 aaPredicted RBP4.24□□□□□ -1.73
LSM5-209ENST00000468872 RIGQ13278 110 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 NECTIN1Q15223 517 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 MLF2Q15773 248 aaPredicted RBP4.24□□□□□ -1.73
LSM5-209ENST00000468872 MOGAT2Q3SYC2 334 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 MPPE1Q53F39 396 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 HERC4Q5GLZ8 1057 aaPredicted RBP4.24□□□□□ -1.73
LSM5-209ENST00000468872 NEK5Q6P3R8 708 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 ZNF730Q6ZMV8 503 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 GDPGP1Q6ZNW5 385 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 ITIH5Q86UX2 942 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 ELMOD2Q8IZ81 293 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 C11orf52Q96A22 123 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 MRPL24Q96A35 216 aaKnown RBP4.24□□□□□ -1.73
LSM5-209ENST00000468872 OPRPNQ99935 248 aaPredicted RBP4.24□□□□□ -1.73
LSM5-209ENST00000468872 SIRPDQ9H106 197 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 HSD3B7Q9H2F3 369 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 KCNK13Q9HB14 408 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 PLEKHA3Q9HB20 300 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 NDE1Q9NXR1 346 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 COPS7AQ9UBW8 275 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 DIMT1Q9UNQ2 313 aaKnown RBP4.24□□□□□ -1.73
LSM5-209ENST00000468872 ABCC2Q92887 1545 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 SIGLEC1Q9BZZ2 1709 aa4.24□□□□□ -1.73
LSM5-209ENST00000468872 CUL9Q8IWT3 2517 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 MAGI3Q5TCQ9 1506 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 ARAP3Q8WWN8 1544 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 IQCMA0A1B0GVH7 501 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 OR5H15A6NDH6 313 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 ARHGAP42A6NI28 874 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 YJEFN3A6XGL0 299 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 EEF2KO00418 725 aaKnown RBP4.23□□□□□ -1.73
LSM5-209ENST00000468872 PRPSAP2O60256 369 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 KIAA0513O60268 411 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 CCDC192P0DO97 292 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 ETS1P14921 441 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 IL10P22301 178 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 MAPK3P27361 379 aaPredicted RBP4.23□□□□□ -1.73
LSM5-209ENST00000468872 MARCKSP29966 332 aaPredicted RBP4.23□□□□□ -1.73
LSM5-209ENST00000468872 CCL11P51671 97 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 ATXN3P54252 364 aaPredicted RBP4.23□□□□□ -1.73
LSM5-209ENST00000468872 TMEM50BP56557 158 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 ABCE1P61221 599 aaKnown RBP4.23□□□□□ -1.73
LSM5-209ENST00000468872 ERVK-16P61578 105 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 RBBP4Q09028 425 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 KIAA0141Q14154 515 aaPredicted RBP4.23□□□□□ -1.73
LSM5-209ENST00000468872 GAMTQ14353 236 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 EXOSC7Q15024 291 aaKnown RBP4.23□□□□□ -1.73
LSM5-209ENST00000468872 GPAT3Q53EU6 434 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 DCAF12Q5T6F0 453 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 OR6B2Q6IFH4 312 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 PARP8Q8N3A8 854 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 OR52B6Q8NGF0 335 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 RPGRIP1Q96KN7 1286 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 POM121L2Q96KW2 1035 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 AGAP4Q96P64 663 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 TAAR6Q96RI8 345 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 SPAG8Q99932 426 aaPredicted RBP4.23□□□□□ -1.73
LSM5-209ENST00000468872 FGFBP2Q9BYJ0 223 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 C1orf21Q9H246 121 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 PARLQ9H300 379 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 THEGQ9P2T0 379 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 THAP10Q9P2Z0 257 aaPredicted RBP4.23□□□□□ -1.73
LSM5-209ENST00000468872 CCPG1Q9ULG6 757 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 NUDCQ9Y266 331 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 NPC1L1Q9UHC9 1359 aa4.23□□□□□ -1.73
LSM5-209ENST00000468872 RTEL1-TNFRSF6BF6WH68 1400 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 SOGA1O94964 1423 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 IGKV3D-15A0A087WSY6 115 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 TMEM89A2RUT3 159 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 C19orf81C9J6K1 198 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 ARHGEF9O43307 516 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 NME2P1O60361 137 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 STAM2O75886 525 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 ANXA9O76027 345 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 OR6A2O95222 327 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 CCNA2P20248 432 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 PKLRP30613 574 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 FCGR2BP31994 310 aaPredicted RBP4.22□□□□□ -1.73
LSM5-209ENST00000468872 FCGR2CP31995 323 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 MTIF2P46199 727 aaKnown RBP4.22□□□□□ -1.73
LSM5-209ENST00000468872 ZFP36L2P47974 494 aaKnown RBP4.22□□□□□ -1.73
LSM5-209ENST00000468872 CLK1P49759 484 aaKnown RBP4.22□□□□□ -1.73
LSM5-209ENST00000468872 TKTL1P51854 596 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 CRYBA2P53672 197 aa4.22□□□□□ -1.73
LSM5-209ENST00000468872 NLRP11P59045 1033 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms