RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 STARD4Q96DR4 205 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 PLPPR2Q96GM1 343 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 SNF8Q96H20 258 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 TSNARE1Q96NA8 513 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 TNFRSF13CQ96RJ3 184 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 TCF12Q99081 682 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 KLHL4Q9C0H6 718 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 AICDAQ9GZX7 198 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 CCDC68Q9H2F9 335 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ESRP2Q9H6T0 727 aaKnown RBP9.29□□□□□ -0.92
HDAC3-203ENST00000467533 CHODLQ9H9P2 273 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 BARX1Q9HBU1 254 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ETNK1Q9HBU6 452 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ADAMTS6Q9UKP5 1117 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 PDE10AQ9Y233 779 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 LIPT1Q9Y234 373 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 IKBKGQ9Y6K9 419 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ROS1P08922 2347 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 EXPH5Q8NEV8 1989 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 ANKRD33BA6NCL7 494 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 PABPN1LA6NDY0 278 aaKnown RBP9.28□□□□□ -0.92
HDAC3-203ENST00000467533 GOLGA6L9A6NEM1 432 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 TP53I11O14683 189 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 GNB5O14775 395 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 ERI3O43414 337 aaKnown RBP9.28□□□□□ -0.92
HDAC3-203ENST00000467533 KLF4O43474 513 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 SSX4O60224 188 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 CTNSO60931 367 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 LDB3O75112 727 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 NDUFS7O75251 213 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 SNX4O95219 450 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 THBDP07204 575 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 SERPINA6P08185 405 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 SOD3P08294 240 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 COX7A2P14406 83 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 OGNP20774 298 aaKnown RBP9.28□□□□□ -0.92
HDAC3-203ENST00000467533 HNF1AP20823 631 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 IGFBP5P24593 272 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 DPP4P27487 766 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 ARNTP27540 789 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 CTNNA1P35221 906 aaKnown RBP9.28□□□□□ -0.92
HDAC3-203ENST00000467533 FDFT1P37268 417 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 CETN2P41208 172 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 ID2Q02363 134 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 FAPQ12884 760 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 CTBP1Q13363 440 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 SERTAD2Q14140 314 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 RCN2Q14257 317 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 IQCB1Q15051 598 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 RPS6KA2Q15349 733 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 NTRK2Q16620 822 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 FAM174BQ3ZCQ3 159 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 CYB5R2Q6BCY4 276 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 C11orf63Q6NUN7 778 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 AADACL2Q6P093 401 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 C22orf34Q6ZV56 151 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 WFDC8Q8IUA0 241 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 PALM2Q8IXS6 379 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 SLC5A11Q8WWX8 675 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 CCT6BQ92526 530 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 NEIL2Q969S2 332 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 FBXW5Q969U6 566 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 UCN2Q96RP3 112 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 GPR21Q99679 349 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 BPIFA3Q9BQP9 254 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 L2HGDHQ9H9P8 463 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 COPS7BQ9H9Q2 264 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-203ENST00000467533 TEX10Q9NXF1 929 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-203ENST00000467533 GDF2Q9UK05 429 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-203ENST00000467533 KCNS2Q9ULS6 477 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 MAGED1Q9Y5V3 778 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-203ENST00000467533 YLPM1P49750 1951 aaKnown RBP9.28□□□□□ -0.92
HDAC3-203ENST00000467533 MGAM2Q2M2H8 2515 aa9.28□□□□□ -0.92
HDAC3-203ENST00000467533 PKD1L1Q8TDX9 2849 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 A0A096LNT2 108 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 FAM234BA2RU67 622 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 BTNL10A8MVZ5 291 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 PLOD2O00469 737 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 CYR61O00622 381 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 TCF21O43680 179 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 DYRK3O43781 588 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 TGM6O95932 706 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 CRHP06850 196 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 APRTP07741 180 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 F7P08709 466 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-203ENST00000467533 CERS1P27544 350 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 HADHBP55084 474 aaKnown RBP9.27□□□□□ -0.93
HDAC3-203ENST00000467533 LIM2P55344 173 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 SQLEQ14534 574 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 EFTUD2Q15029 972 aaKnown RBP eCLIP9.27□□□□□ -0.932e-11■■■■■ 38.8
HDAC3-203ENST00000467533 FNDC7Q5VTL7 733 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 OR2A2Q6IF42 318 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 CES3Q6UWW8 571 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 SLC29A4Q7RTT9 530 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 TMPRSS11BQ86T26 416 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 CILP2Q8IUL8 1156 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-203ENST00000467533 OR14L1PQ8NHC6 308 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 CD200R1Q8TD46 325 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 KCNJ9Q92806 393 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms