RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 NR1D1P20393 614 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 PIK3R1P27986 724 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 HEPACAMQ14CZ8 416 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 GALNTL6Q49A17 601 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 ATP6AP1LQ52LC2 224 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 RFTN2Q52LD8 501 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 AGAP7PQ5VUJ5 663 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 ST13P4Q8IZP2 240 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 OR4K14Q8NGD5 310 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 OR14A16Q8NHC5 309 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 ELP5Q8TE02 316 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 PTPMT1Q8WUK0 201 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 ZNF75CPQ92670 426 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 DAZLQ92904 295 aaKnown RBP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 AGAP4Q96P64 663 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 MYNNQ9NPC7 610 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 ZNF71Q9NQZ8 489 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 INTS9Q9NV88 658 aaKnown RBP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 PNPOQ9NVS9 261 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 C5AR2Q9P296 337 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 WBP11Q9Y2W2 641 aaKnown RBP18.96■□□□□ 0.63
PTCD3-206ENST00000465560 CLCA3PQ9Y6N3 262 aa18.96■□□□□ 0.63
PTCD3-206ENST00000465560 ATP6AP2A0A1C7CYW4 349 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 C17orf105B2RV13 164 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 ATP6AP2O75787 350 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 SOX11P35716 441 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 ALDH9A1P49189 494 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 CRB2Q5IJ48 1285 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 IKBIPQ70UQ0 350 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 HPS6Q86YV9 775 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 APCDD1LQ8NCL9 501 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 DYDC1Q8WWB3 177 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 RBM18Q96H35 190 aaKnown RBP18.95■□□□□ 0.62
PTCD3-206ENST00000465560 KCNK13Q9HB14 408 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 PSME2Q9UL46 239 aa18.95■□□□□ 0.62
PTCD3-206ENST00000465560 SPTA1P02549 2419 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 PEX11AO75192 247 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 SLC35E2P0CK97 266 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 SDC1P18827 310 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 TNNI3P19429 210 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 GALNSP34059 522 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 GPR143P51810 404 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 HK2P52789 917 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 FAM71E1Q6IPT2 247 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 H3F3CQ6NXT2 135 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 ASB18Q6ZVZ8 466 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 SIRT6Q8N6T7 355 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 MORN4Q8NDC4 146 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 CDC26Q8NHZ8 85 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 LRRC8CQ8TDW0 803 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 KLHL29Q96CT2 875 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 TUBGCP3Q96CW5 907 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 VMP1Q96GC9 406 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 EHD3Q9NZN3 535 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 PTGFRNQ9P2B2 879 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 GIMAP2Q9UG22 337 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 UTS2RQ9UKP6 389 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 KALRNO60229 2985 aa18.94■□□□□ 0.62
PTCD3-206ENST00000465560 A0A1W2PS29 197 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 OR10H2O60403 315 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 CPMP14384 443 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 DDCP20711 480 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 TACR1P25103 407 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 MAPK1P28482 360 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 CLCN2P51788 898 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 XKP51811 444 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 C2orf80Q0P641 193 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 SPRED3Q2MJR0 410 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 HSP90B2PQ58FF3 399 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 C6orf136Q5SQH8 315 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 IGFL2Q6UWQ7 119 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 ISLR2Q6UXK2 745 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 KIF2BQ8N4N8 673 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 SLC2A12Q8TD20 617 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 NCLNQ969V3 563 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 PPWD1Q96BP3 646 aaKnown RBP18.93■□□□□ 0.62
PTCD3-206ENST00000465560 NUF2Q9BZD4 464 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 MED4Q9NPJ6 270 aa18.93■□□□□ 0.62
PTCD3-206ENST00000465560 DYRK3O43781 588 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 ERAL1O75616 437 aaKnown RBP18.92■□□□□ 0.62
PTCD3-206ENST00000465560 DDAH2O95865 285 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 PORP16435 677 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-206ENST00000465560 MFAP5Q13361 173 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 B3GNTL1Q67FW5 361 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-206ENST00000465560 IGFL3Q6UXB1 125 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 DGAT2L6Q6ZPD8 337 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 FNDC5Q8NAU1 212 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 OR1N1Q8NGS0 311 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 TM9SF4Q92544 642 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 CNRIP1Q96F85 164 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-206ENST00000465560 EGLN2Q96KS0 407 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 PPP1R36Q96LQ0 422 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 C7orf26Q96N11 449 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 ZNF681Q96N22 645 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 LMF1Q96S06 567 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 OR8D2Q9GZM6 311 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 EPS8L2Q9H6S3 715 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 MEAF6Q9HAF1 191 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 ZBTB20Q9HC78 741 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms