RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ACBD4Q8NC06 268 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 NOA1Q8NC60 698 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 MNS1Q8NEH6 495 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 OR2M7Q8NG81 312 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 AGAP11Q8TF27 550 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 FBXL20Q96IG2 436 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 SCYL1Q96KG9 808 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ART5Q96L15 291 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 DGAT2Q96PD7 388 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 MTERF1Q99551 399 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 PELOQ9BRX2 385 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 VPS11Q9H270 941 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 CDC42EP4Q9H3Q1 356 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ZDHHC11Q9H8X9 412 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 LIN28AQ9H9Z2 209 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 SH2D2AQ9NP31 389 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF358Q9NW07 568 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 LYARQ9NX58 379 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 COPS7AQ9UBW8 275 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF180Q9UJW8 692 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 HRH3Q9Y5N1 445 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ABCA12Q86UK0 2595 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 A0A1B0GTH9 108 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 A0A1W2PR48 441 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 PINLYPA6NC86 204 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 ZNHIT1O43257 154 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 DYRK3O43781 588 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 TMPRSS11DO60235 418 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 EEDO75530 441 aaKnown RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 KRT38O76015 456 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 IGHG3P01860 377 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 INHBAP08476 426 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 FAM58BPP0C7Q3 252 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 SLC35E2P0CK97 266 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 ALOX15P16050 662 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 RFC3P40938 356 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 BUD31P41223 144 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 NEK2P51955 445 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 GPR85P60893 370 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 PPIAP62937 165 aaKnown RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 ID2Q02363 134 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 FOLH1Q04609 750 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 FOXO1Q12778 655 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 CDSNQ15517 529 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 SPRED3Q2MJR0 410 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 TSNAXIP1Q2TAA8 658 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF750Q32MQ0 723 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF791Q3KP31 576 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 FRG2Q64ET8 278 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 C18orf63Q68DL7 685 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 LYPD8Q6UX82 237 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 DGAT2L6Q6ZPD8 337 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 MYLK4Q86YV6 388 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 MCEMP1Q8IX19 187 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 DND1Q8IYX4 353 aaKnown RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 PTGR2Q8N8N7 351 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 MYRIPQ8NFW9 859 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 OR52N2Q8NGI0 321 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 PPWD1Q96BP3 646 aaKnown RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 MTFMTQ96DP5 389 aaKnown RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 C16orf45Q96MC5 204 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 FRG2BQ96QU4 278 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 FMO2Q99518 471 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 SERPINI1Q99574 410 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 SPOCK3Q9BQ16 436 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 MRPL57Q9BQC6 102 aaKnown RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 FAM173AQ9BQD7 235 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 C1QTNF3Q9BXJ4 246 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 NOL11Q9H8H0 719 aaKnown RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 IL1RL2Q9HB29 575 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 ZBTB26Q9HCK0 441 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 SACM1LQ9NTJ5 587 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 CPSF2Q9P2I0 782 aaKnown RBP8.47□□□□□ -1.05
BRCA1-207ENST00000461798 ADAM29Q9UKF5 820 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 PCTPQ9UKL6 214 aa8.47□□□□□ -1.05
BRCA1-207ENST00000461798 CRYBG3Q68DQ2 2970 aa8.46□□□□□ -1.05
BRCA1-207ENST00000461798 NCOA6Q14686 2063 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-207ENST00000461798 A0A1B0GVC2 190 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 OR14I1A6ND48 311 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 OR6C76A6NM76 312 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 ENO4A6NNW6 628 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 WASHC1A8K0Z3 465 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 NADKO95544 446 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-207ENST00000461798 ACSL3O95573 720 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 AVPP01185 164 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 SBK3P0C264 359 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 CTAGE8P0CG41 777 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 TNFRSF8P28908 595 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 PLIN5Q00G26 463 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 TBL3Q12788 808 aaKnown RBP8.46□□□□□ -1.06
BRCA1-207ENST00000461798 GTF3C1Q12789 2109 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 ASPHQ12797 758 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 TRAF3Q13114 568 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 GGTA1PQ4G0N0 100 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 EMC4Q5J8M3 183 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
BRCA1-207ENST00000461798 TMEM211Q6ICI0 200 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 BLOC1S3Q6QNY0 202 aa8.46□□□□□ -1.06
BRCA1-207ENST00000461798 CYP20A1Q6UW02 462 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms