RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PELOQ9BRX2 385 aaKnown RBP14.32□□□□□ -0.12
VARS-219ENST00000461328 MID1IP1Q9NPA3 183 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 ZNF225Q9UK10 706 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 ADAM29Q9UKF5 820 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 ASB4Q9Y574 426 aa14.32□□□□□ -0.12
VARS-219ENST00000461328 A0A1B0GUH1 482 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 ULK1O75385 1050 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 ITGA10O75578 1167 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 SLC25A12O75746 678 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 HSD3B1P14060 373 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 CPA3P15088 417 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 HSD3B2P26439 372 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 STT3AP46977 705 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 SSR4P51571 173 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 NAGLUP54802 743 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 RBPJQ06330 500 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 CSTF3Q12996 717 aaKnown RBP14.31□□□□□ -0.12
VARS-219ENST00000461328 C1QL3Q5VWW1 255 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 SH2D5Q6ZV89 423 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 SRRM1Q8IYB3 904 aaKnown RBP14.31□□□□□ -0.12
VARS-219ENST00000461328 METTL4Q8N3J2 472 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 PPWD1Q96BP3 646 aaKnown RBP14.31□□□□□ -0.12
VARS-219ENST00000461328 APOPT1Q96IL0 206 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 ART5Q96L15 291 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 CNPPD1Q9BV87 410 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 PARD6BQ9BYG5 372 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 C12orf65Q9H3J6 166 aaKnown RBP14.31□□□□□ -0.12
VARS-219ENST00000461328 GSTO2Q9H4Y5 243 aa14.31□□□□□ -0.12
VARS-219ENST00000461328 TEX10Q9NXF1 929 aaPredicted RBP14.31□□□□□ -0.12
VARS-219ENST00000461328 ZNF223Q9UK11 482 aaPredicted RBP14.31□□□□□ -0.12
VARS-219ENST00000461328 PPIEQ9UNP9 301 aaKnown RBP14.31□□□□□ -0.12
VARS-219ENST00000461328 SPTBN1Q01082 2364 aaKnown RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 NME2P1O60361 137 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 GUCY1B2O75343 617 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 ESRRBO95718 433 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 GPR75O95800 540 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 NME2P22392 152 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 PIK3R1P27986 724 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 TRHRP34981 398 aaPredicted RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 HTR6P50406 440 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 HLCSP50747 726 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 NAA20P61599 178 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 IGLV3-21P80748 117 aaPredicted RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 ALDH6A1Q02252 535 aaKnown RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 SLC18A2Q05940 514 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 BIKQ13323 160 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 NDUFAF5Q5TEU4 345 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 C6orf163Q5TEZ5 329 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 FRMD7Q6ZUT3 714 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 MAMDC2Q7Z304 686 aaPredicted RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 FJX1Q86VR8 437 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 ST13P4Q8IZP2 240 aaPredicted RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 CYP4Z2PQ8N1L4 340 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 ARMC10Q8N2F6 343 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 C1orf52Q8N6N3 182 aaKnown RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 ZNF321PQ8N8H1 164 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 AGAP11Q8TF27 550 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 ASB15Q8WXK1 588 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 FRMD6Q96NE9 622 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 KCNA7Q96RP8 456 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 ROPN1BQ9BZX4 212 aaPredicted RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 LIN28AQ9H9Z2 209 aaKnown RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 ROPN1Q9HAT0 212 aaPredicted RBP14.3□□□□□ -0.12
VARS-219ENST00000461328 VPS29Q9UBQ0 182 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 LGALS13Q9UHV8 139 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 ERVK-11Q9UQG0 969 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 TIMM22Q9Y584 194 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 SVILO95425 2214 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 POLEQ07864 2286 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 ICE1Q9Y2F5 2266 aa14.3□□□□□ -0.12
VARS-219ENST00000461328 TRGV8A0A0C4DH27 118 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 ASPDHA6ND91 283 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 A8MVJ9 347 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 WWP2O00308 870 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 PRKNO60260 465 aaPredicted RBP14.29□□□□□ -0.12
VARS-219ENST00000461328 OR2J2O76002 312 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 CLDN1O95832 211 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 GPR143P51810 404 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 DNAJB13P59910 316 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 GALNT1Q10472 559 aaPredicted RBP14.29□□□□□ -0.12
VARS-219ENST00000461328 IMPG1Q17R60 797 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 KRT71Q3SY84 523 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 LIPMQ5VYY2 423 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 SCIMPQ6UWF3 145 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 C16orf47Q6ZP98 133 aaPredicted RBP14.29□□□□□ -0.12
VARS-219ENST00000461328 TRABD2AQ86V40 505 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 GBP7Q8N8V2 638 aaPredicted RBP14.29□□□□□ -0.12
VARS-219ENST00000461328 OR5L2Q8NGL0 311 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 DOK4Q8TEW6 326 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 RIT1Q92963 219 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 SMC6Q96SB8 1091 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 FAIM2Q9BWQ8 316 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 ACPTQ9BZG2 426 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 TSPAN10Q9H1Z9 355 aaPredicted RBP14.29□□□□□ -0.12
VARS-219ENST00000461328 TRIM45Q9H8W5 580 aaPredicted RBP14.29□□□□□ -0.12
VARS-219ENST00000461328 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.29□□□□□ -0.123e-6■■■□□ 15
VARS-219ENST00000461328 HPF1Q9NWY4 346 aa14.29□□□□□ -0.12
VARS-219ENST00000461328 YARS2Q9Y2Z4 477 aaKnown RBP14.29□□□□□ -0.12
VARS-219ENST00000461328 GNG14A0A1W2PPG7 69 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms