RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 BSGP35613 385 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 CPOXP36551 454 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 FDFT1P37268 417 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 CETN2P41208 172 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 NPY2RP49146 381 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 SUOXP51687 545 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 PGGT1BP53609 377 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 GEMP55040 296 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 POLR2LP62875 67 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 DR1Q01658 176 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 RAD51Q06609 339 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 FRG1Q14331 258 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 FZD2Q14332 565 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 POU6F1Q14863 301 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 IRF4Q15306 451 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 SF3A2Q15428 464 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 TAF1AQ15573 450 aaPredicted RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 ALG11Q2TAA5 492 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 KIF19Q2TAC6 998 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 ANKRD20A4Q4UJ75 823 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 ODF2Q5BJF6 829 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 VWA5B1Q5TIE3 1220 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 HIST2H2BCQ6DN03 193 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 HIST2H2BDQ6DRA6 164 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 CCNI2Q6ZMN8 369 aaPredicted RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 Q6ZSR6 202 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 PRSS45Q7RTY3 260 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 LDB1Q86U70 411 aaPredicted RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 GPAT4Q86UL3 456 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 NRROSQ86YC3 692 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 ZNF547Q8IVP9 402 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 TMEM116Q8NCL8 245 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 DNAAF1Q8NEP3 725 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 ACVR1CQ8NER5 493 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 CCL4L1Q8NHW4 92 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 DTX3LQ8TDB6 740 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 SNRNP27Q8WVK2 155 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 RAB7BQ96AH8 199 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 RMDN1Q96DB5 314 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 TRIM44Q96DX7 344 aaPredicted RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 FAM120BQ96EK7 910 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 WBP1Q96G27 269 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 DNAJC1Q96KC8 554 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 RANBP9Q96S59 729 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 NAP1L3Q99457 506 aaPredicted RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 NRTNQ99748 197 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 APOOQ9BUR5 198 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 RIOK2Q9BVS4 552 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 ARRDC1-AS1Q9H2J1 176 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 DPH5Q9H2P9 285 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 FAM96AQ9H5X1 160 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 MOV10Q9HCE1 1003 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 EPB41L5Q9HCM4 733 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 TM9SF3Q9HD45 589 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 MRPL40Q9NQ50 206 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 NLE1Q9NVX2 485 aaPredicted RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 KIAA1456Q9P272 454 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 BCCIPQ9P287 314 aaKnown RBP eCLIP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 GALPQ9UBC7 116 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 PLEKHB1Q9UF11 243 aaPredicted RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 SLC23A2Q9UGH3 650 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 RPS6KA6Q9UK32 745 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 AAR2Q9Y312 384 aaKnown RBP3.75□□□□□ -1.81
UBDP1-202ENST00000457888 ZNF711Q9Y462 761 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 PRSS21Q9Y6M0 314 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 LRP4O75096 1905 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 ANKRD12Q6UB98 2062 aa3.75□□□□□ -1.81
UBDP1-202ENST00000457888 ATXN2Q99700 1313 aaKnown RBP3.74□□□□□ -1.81
UBDP1-202ENST00000457888 IGLV3-16A0A075B6K0 115 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 C1orf232A0A0U1RR37 186 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 SPTY2D1-AS1A0A0U1RR47 76 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 A0A1W2PQ67 120 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 TMEM247A6NEH6 219 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 LRRC72A6NJI9 287 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 SDR42E2A6NKP2 422 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 ERI2A8K979 691 aaKnown RBP3.74□□□□□ -1.81
UBDP1-202ENST00000457888 KIF2AO00139 706 aaPredicted RBP3.74□□□□□ -1.81
UBDP1-202ENST00000457888 TLR4O00206 839 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 PSMD11O00231 422 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 SCAMP1O15126 338 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 BCAT2O15382 392 aaPredicted RBP3.74□□□□□ -1.81
UBDP1-202ENST00000457888 PSMD3O43242 534 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 OR1I1O60431 355 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 RNASEH1O60930 286 aaKnown RBP3.74□□□□□ -1.81
UBDP1-202ENST00000457888 MTX2O75431 263 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 TM7SF2O76062 418 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 EPN2O95208 641 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 EML2O95834 649 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 FGF1P05230 155 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 TUBBP07437 444 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 HOXC4P09017 264 aaPredicted RBP3.74□□□□□ -1.81
UBDP1-202ENST00000457888 ZNF806P0C7X5 589 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 MLNP12872 115 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 ZNF30P17039 623 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 HNRNPA2B1P22626 353 aaKnown RBP3.74□□□□□ -1.81
UBDP1-202ENST00000457888 MSNP26038 577 aaKnown RBP3.74□□□□□ -1.81
UBDP1-202ENST00000457888 GCAP28676 217 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 TTKP33981 857 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 ELK3P41970 407 aa3.74□□□□□ -1.81
UBDP1-202ENST00000457888 DHPSP49366 369 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms