RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 TIAM2Q8IVF5 1701 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 FMN2Q9NZ56 1722 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 SPATA31A5Q5VU36 1347 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 SPATA31A7Q8IWB4 1347 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 HYKKA2RU49 373 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 EFCAB7A8K855 629 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 CA12O43570 354 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 OPN1SWP03999 348 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ALDH2P05091 517 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 PIPP12273 146 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ZP3P21754 424 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 CD34P28906 385 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 PRKAR1BP31321 381 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 GABRA5P31644 462 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 BAG6P46379 1132 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 WDR5P61964 334 aaKnown RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 EVX2Q03828 476 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 LASP1Q14847 261 aaKnown RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 BRAT1Q6PJG6 821 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ENPP7Q6UWV6 458 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 SPATC1Q76KD6 591 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 PIM3Q86V86 326 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 NUDT13Q86X67 352 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 LRRC56Q8IYG6 542 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 TRMT10AQ8TBZ6 339 aaKnown RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 UPF1Q92900 1129 aaKnown RBP eCLIP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 COPS5Q92905 334 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ESAMQ96AP7 390 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 YIPF6Q96EC8 236 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 MAP6Q96JE9 813 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF300Q96RE9 604 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 C12orf57Q99622 126 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 C20orf27Q9GZN8 174 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF700Q9H0M5 742 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 OR10A4Q9H209 315 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 SLC25A32Q9H2D1 315 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 CAPN10Q9HC96 672 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 CRTAC1Q9NQ79 661 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 SIX4Q9UIU6 781 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 NME7Q9Y5B8 376 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 CORINQ9Y5Q5 1042 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 SNED1Q8TER0 1413 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF541Q9H0D2 1346 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 OR2AG2A6NM03 316 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 UBFD1O14562 309 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CXCL11O14625 94 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MMP20O60882 483 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 FARS2O95363 451 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 GLUD1P00367 558 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 LRG1P02750 347 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 TPOP07202 933 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ASGR1P07306 291 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 HTR1AP08908 422 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ALPPL2P10696 532 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 GKP32189 559 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 BMP8BP34820 402 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 AVPR1BP47901 424 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 NUMBP49757 651 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CEBPGP53567 150 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ISL1P61371 349 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SCGB2B2Q4G0G5 96 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZBTB37Q5TC79 503 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF627Q7L945 461 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 BMP8AQ7Z5Y6 402 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ENTHD1Q8IYW4 607 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 WDTC1Q8N5D0 677 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF680Q8NEM1 530 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 OR2L3Q8NG85 312 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 OR52N2Q8NGI0 321 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 TMEM163Q8TC26 289 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 NETO1Q8TDF5 533 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 OR5B12Q96R08 314 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CLCC1Q96S66 551 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 VRK1Q99986 396 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 C1QTNF7Q9BXJ2 289 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 GABARAPL1Q9H0R8 117 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ABHD16BQ9H3Z7 469 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 WDR26Q9H7D7 661 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SLC22A11Q9NSA0 550 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZCCHC3Q9NUD5 404 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 LOC105369274A0A096LPK9 316 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 LOC102723532A0A0G2JNH3 316 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 C13orf42A0A1B0GVH6 325 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 OR6C65A6NJZ3 312 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ELOA3DA6NLF2 546 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CPSF4LA6NMK7 179 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 NUPL2O15504 423 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 TXNL1O43396 289 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 TGOLN2O43493 480 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SOX14O95416 240 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 TSPAN15O95858 294 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 RAB40ALP0C0E4 278 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 PGAM2P15259 253 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 RPS2P15880 293 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 UGT2B7P16662 529 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 RBMXP38159 391 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 PSPHP78330 225 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 UGT3A2Q3SY77 523 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ELOA3BQ3SY89 546 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms