RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PRRG2O14669 202 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 OR6B1O95007 311 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 GSTA1P08263 222 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 RHOXF2BP0C7M4 288 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 AGAP20933 346 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 GCAP28676 217 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 DCTP40126 519 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 SOX3P41225 446 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 SMSP52788 366 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 TBL3Q12788 808 aaKnown RBP16.56■□□□□ 0.24
MSH6-207ENST00000456246 C3AR1Q16581 482 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 RNFT1Q5M7Z0 435 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 IL20RBQ6UXL0 311 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 GK5Q6ZS86 529 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 TMEM151AQ8N4L1 468 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 SLC15A4Q8N697 577 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 ZNF321PQ8N8H1 164 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 ITLN2Q8WWU7 325 aaPredicted RBP16.56■□□□□ 0.24
MSH6-207ENST00000456246 RHOXF2Q9BQY4 288 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 TRPS1Q9UHF7 1281 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 SH3BGRL2Q9UJC5 107 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 OR6C76A6NM76 312 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 ACOT7O00154 380 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 AIFM1O95831 613 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 SBK3P0C264 359 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 SLC35E2P0CK97 266 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 SLC29A2Q14542 456 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 TEX35Q5T0J7 233 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 XKRXQ6PP77 449 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 PAOXQ6QHF9 649 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 C16orf47Q6ZP98 133 aaPredicted RBP16.55■□□□□ 0.24
MSH6-207ENST00000456246 SLC29A4Q7RTT9 530 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 SLC22A9Q8IVM8 553 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 METTL4Q8N3J2 472 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 TRPC4APQ8TEL6 797 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 SELENOMQ8WWX9 145 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 RIT1Q92963 219 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 MTFMTQ96DP5 389 aaKnown RBP16.55■□□□□ 0.24
MSH6-207ENST00000456246 TXLNGYQ9BZA5 131 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 LIN28AQ9H9Z2 209 aaKnown RBP16.55■□□□□ 0.24
MSH6-207ENST00000456246 PPCSQ9HAB8 311 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 TINAGQ9UJW2 476 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 ENTPD4Q9Y227 616 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 GTF3C1Q12789 2109 aa16.55■□□□□ 0.24
MSH6-207ENST00000456246 HSD3B1P14060 373 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 ATP5F1P24539 256 aaPredicted RBP16.54■□□□□ 0.24
MSH6-207ENST00000456246 HSD3B2P26439 372 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 PIK3R1P27986 724 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 GPR85P60893 370 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 CLCQ05315 142 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 RASA2Q15283 850 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 PIGGQ5H8A4 983 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 NDUFAF5Q5TEU4 345 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 RNF111Q6ZNA4 994 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 MRGPRGQ86SM5 289 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 SLC22A16Q86VW1 577 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 OR2M7Q8NG81 312 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 PHF10Q8WUB8 498 aaKnown RBP16.54■□□□□ 0.24
MSH6-207ENST00000456246 PPWD1Q96BP3 646 aaKnown RBP16.54■□□□□ 0.24
MSH6-207ENST00000456246 ZNF382Q96SR6 550 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 FAM173AQ9BQD7 235 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 CNPPD1Q9BV87 410 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 SACM1LQ9NTJ5 587 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 TMEM216Q9P0N5 145 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 SLC12A4Q9UP95 1085 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 MEMO1Q9Y316 297 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 PCNX1Q96RV3 2341 aa16.54■□□□□ 0.24
MSH6-207ENST00000456246 PRSS44E7EML9 344 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 HS6ST1O60243 411 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 PRKRAO75569 313 aaKnown RBP16.53■□□□□ 0.24
MSH6-207ENST00000456246 WISP2O76076 250 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 SUPT7LO94864 414 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 KRT6AP02538 564 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 KRT6BP04259 564 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 KLK1P06870 262 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 CNR1P21554 472 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 COL8A1P27658 744 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 PTGS2P35354 604 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 HSD17B3P37058 310 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 KRT6CP48668 564 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 MAPK12P53778 367 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 CDH13P55290 713 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 ERVK-8P63133 956 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 PLGLB1Q02325 96 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 ZNF678Q5SXM1 525 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 CCNYL2Q5T2Q4 361 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 C6orf163Q5TEZ5 329 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 ZNF787Q6DD87 383 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 LETMD1Q6P1Q0 360 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 ARHGAP11AQ6P4F7 1023 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 C9orf40Q8IXQ3 194 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.53■□□□□ 0.24
MSH6-207ENST00000456246 CCDC126Q96EE4 140 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 MRPL1Q9BYD6 325 aaKnown RBP16.53■□□□□ 0.24
MSH6-207ENST00000456246 RUBCNLQ9H714 662 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 PLSCR2Q9NRY7 297 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 TEX10Q9NXF1 929 aaPredicted RBP16.53■□□□□ 0.24
MSH6-207ENST00000456246 DCDC2Q9UHG0 476 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 ERVK-19Q9WJR5 959 aa16.53■□□□□ 0.24
MSH6-207ENST00000456246 C1orf226A1L170 272 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms