RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ZNF721Q8TF20 911 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 SELENOMQ8WWX9 145 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 MTBPQ96DY7 904 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 RBM18Q96H35 190 aaKnown RBP8.98□□□□□ -0.97
USP54-207ENST00000451492 FRG2BQ96QU4 278 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 NTMT1Q9BV86 223 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 EPB41L4BQ9H329 900 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 TIMMDC1Q9NPL8 285 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 MYOTQ9UBF9 498 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 PPIEQ9UNP9 301 aaKnown RBP8.98□□□□□ -0.97
USP54-207ENST00000451492 ASB4Q9Y574 426 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 A0A1W2PPM1 405 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 PINLYPA6NC86 204 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 SYNDIG1LA6NDD5 238 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 WIPF3A6NGB9 483 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 PRSS44E7EML9 344 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 FOXE1O00358 373 aaPredicted RBP8.97□□□□□ -0.97
USP54-207ENST00000451492 PGRMC2O15173 223 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 ASNA1O43681 348 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 DLX3O60479 287 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 OTCP00480 354 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 TPOP07202 933 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 KRT15P19012 456 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 PIK3R1P27986 724 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 HMOX2P30519 316 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 DCTP40126 519 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 CA7P43166 264 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 ALDH9A1P49189 494 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 HTR6P50406 440 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 NR0B1P51843 470 aaKnown RBP8.97□□□□□ -0.97
USP54-207ENST00000451492 IGLV3-21P80748 117 aaPredicted RBP8.97□□□□□ -0.97
USP54-207ENST00000451492 CLCQ05315 142 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 GGTA1PQ4G0N0 100 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 UNC50Q53HI1 259 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 ZNF678Q5SXM1 525 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 CCNYL2Q5T2Q4 361 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 C6orf163Q5TEZ5 329 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 PRAMEF20Q5VT98 475 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 OR52E8Q6IFG1 317 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 MRM1Q6IN84 353 aaKnown RBP8.97□□□□□ -0.97
USP54-207ENST00000451492 FAM180BQ6P0A1 224 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 METTL2BQ6P1Q9 378 aaKnown RBP8.97□□□□□ -0.97
USP54-207ENST00000451492 RNF111Q6ZNA4 994 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 COMMD6Q7Z4G1 85 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 SIAH3Q8IW03 269 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 ST13P4Q8IZP2 240 aaPredicted RBP8.97□□□□□ -0.97
USP54-207ENST00000451492 GHDCQ8N2G8 530 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 CCDC63Q8NA47 563 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 OR52N2Q8NGI0 321 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 OR5M3Q8NGP4 307 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 EPS8L3Q8TE67 593 aaKnown RBP8.97□□□□□ -0.97
USP54-207ENST00000451492 TANKQ92844 425 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 SENP5Q96HI0 755 aaPredicted RBP8.97□□□□□ -0.97
USP54-207ENST00000451492 ART5Q96L15 291 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 KCNA7Q96RP8 456 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 TXLNGYQ9BZA5 131 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 DEFB127Q9H1M4 99 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 DDX31Q9H8H2 851 aaKnown RBP8.97□□□□□ -0.97
USP54-207ENST00000451492 DEPPQ9NTK1 212 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 TRPS1Q9UHF7 1281 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 SNX6Q9UNH7 406 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 TSC22D4Q9Y3Q8 395 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 CELSR2Q9HCU4 2923 aa8.97□□□□□ -0.97
USP54-207ENST00000451492 NCOA6Q14686 2063 aaPredicted RBP8.96□□□□□ -0.97
USP54-207ENST00000451492 SPTAN1Q13813 2472 aaKnown RBP8.96□□□□□ -0.97
USP54-207ENST00000451492 A0A1B0GTH9 108 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 ACOT7O00154 380 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 ERAL1O75616 437 aaKnown RBP8.96□□□□□ -0.98
USP54-207ENST00000451492 SEMA3DO95025 777 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 ESRRBO95718 433 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 GPR75O95800 540 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 CT62P0C5K7 136 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 CCL3P10147 92 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 NT5EP21589 574 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 ATP5F1P24539 256 aaPredicted RBP8.96□□□□□ -0.98
USP54-207ENST00000451492 SSTR4P31391 388 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 HSD17B3P37058 310 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 DNASE1L1P49184 302 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 MAPK12P53778 367 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 BTKQ06187 659 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 NNATQ16517 81 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 NDUFAF5Q5TEU4 345 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 SCIMPQ6UWF3 145 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 TIFABQ6ZNK6 161 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 RTL4Q6ZR62 310 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 FAM47EQ6ZV65 393 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 SLC29A4Q7RTT9 530 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 PAGE2Q7Z2X7 111 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 MRGPRGQ86SM5 289 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 CD163Q86VB7 1156 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 SPPL2CQ8IUH8 684 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 ARMC10Q8N2F6 343 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 TMEM151AQ8N4L1 468 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 C1orf52Q8N6N3 182 aaKnown RBP8.96□□□□□ -0.98
USP54-207ENST00000451492 CCNYL1Q8N7R7 359 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 FAM13CQ8NE31 585 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 OR2M7Q8NG81 312 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 OR5L2Q8NGL0 311 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 CDC26Q8NHZ8 85 aa8.96□□□□□ -0.98
USP54-207ENST00000451492 SLC22A8Q8TCC7 542 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms