RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CSNK2A2P19784 350 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-203ENST00000449049 NTSP30990 170 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 BTG2P78543 158 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 DUSP2Q05923 314 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 SLC13A2Q13183 592 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 ZNF750Q32MQ0 723 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 MMEL1Q495T6 779 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 OR4N5Q8IXE1 308 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 CLECL1Q8IZS7 167 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 ESX1Q8N693 406 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 SUN3Q8TAQ9 357 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 MIEF2Q96C03 454 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 ZBED6CLQ96FA7 236 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-203ENST00000449049 SPSB2Q99619 263 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 NPAS2Q99743 824 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 MAP10Q9P2G4 905 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 NXT1Q9UKK6 140 aaKnown RBP13.19□□□□□ -0.3
SHMT2-203ENST00000449049 ACSL6Q9UKU0 697 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 IGKV3D-11A0A0A0MRZ8 115 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 A0A1W2PRB8 838 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-203ENST00000449049 C9J4A7 227 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 MRASO14807 208 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 RECKO95980 971 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 C8orf89P0DMQ9 161 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 CPMP14384 443 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 CPA2P48052 419 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 XKP51811 444 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 EFNA3P52797 238 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 NCF4Q15080 339 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 MLIPQ5VWP3 458 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 CPZQ66K79 652 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 ANKRD46Q86W74 232 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 LRRC25Q8N386 305 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-203ENST00000449049 PLPP5Q8NEB5 264 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 GOT1L1Q8NHS2 421 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-203ENST00000449049 ITCHQ96J02 903 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 AMDHD1Q96NU7 426 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 BBS4Q96RK4 519 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 VN1R1Q9GZP7 353 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 GLIPR2Q9H4G4 154 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 EFCAB1Q9HAE3 211 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 NECTIN3Q9NQS3 549 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 GPN3Q9UHW5 284 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-203ENST00000449049 WASF3Q9UPY6 502 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 OR2W5A6NFC9 320 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 STMND1H3BQB6 276 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 UNC5CO95185 931 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 CYC1P08574 325 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 PORP16435 677 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-203ENST00000449049 EFNA1P20827 205 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-203ENST00000449049 MAOAP21397 527 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 FEN1P39748 380 aaKnown RBP13.18□□□□□ -0.3
SHMT2-203ENST00000449049 ID2Q02363 134 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 FOXC1Q12948 553 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 BIKQ13323 160 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 MINDY4Q4G0A6 757 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 LRIF1Q5T3J3 769 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 CCDC121Q6ZUS5 278 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 YTHDF3Q7Z739 585 aaKnown RBP13.18□□□□□ -0.3
SHMT2-203ENST00000449049 LAPTM4BQ86VI4 370 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 NLGN4XQ8N0W4 816 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 PCYOX1LQ8NBM8 494 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 C7orf57Q8NEG2 295 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 NLGN4YQ8NFZ3 816 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-203ENST00000449049 DNAJB8Q8NHS0 232 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 ZFP28Q8NHY6 868 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 OR5P2Q8WZ92 322 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 KLK13Q9UKR3 277 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 ERVK-11Q9UQG0 969 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 A0A096LPI6 279 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 AIM2O14862 343 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 C6orf47O95873 294 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 ATP1B1P05026 303 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 CD63P08962 238 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 RAB40ALP0C0E4 278 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 SLC35E2P0CK97 266 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 HOXB9P17482 250 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-203ENST00000449049 MPIP34949 423 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 TRPC1P48995 793 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 NCBP2P52298 156 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHMT2-203ENST00000449049 MANFP55145 182 aaKnown RBP13.18□□□□□ -0.3
SHMT2-203ENST00000449049 HBA1P69905 142 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 STX4Q12846 297 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 SERTAD2Q14140 314 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 MFSD4BQ5TF39 518 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 HACD2Q6Y1H2 254 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 CCDC116Q8IYX3 515 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 PSMA8Q8TAA3 256 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 CT55Q8WUE5 264 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 PTCHD1Q96NR3 888 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 INPP5KQ9BT40 448 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 SOX17Q9H6I2 414 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-203ENST00000449049 MKL2Q9ULH7 1088 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 SDK2Q58EX2 2172 aa13.18□□□□□ -0.3
SHMT2-203ENST00000449049 TCRBV16S1A1N1A0A5B0 115 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 SYNDIG1LA6NDD5 238 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 RFXANKO14593 260 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 RAD1O60671 282 aa13.17□□□□□ -0.3
SHMT2-203ENST00000449049 HNRNPCL1O60812 293 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms