RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 AMBRA1Q9C0C7 1298 aa16.72■□□□□ 0.27
LMNA-208ENST00000448611 ZCCHC3Q9NUD5 404 aaKnown RBP16.72■□□□□ 0.27
LMNA-208ENST00000448611 POMT2Q9UKY4 750 aa16.72■□□□□ 0.27
LMNA-208ENST00000448611 DNAH14Q0VDD8 3507 aa16.72■□□□□ 0.27
LMNA-208ENST00000448611 GOLGA4Q13439 2230 aaKnown RBP16.72■□□□□ 0.27
LMNA-208ENST00000448611 PRAMEF25A6NGN4 478 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 HS6ST1O60243 411 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 BCHEP06276 602 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 C8orf89P0DMQ9 161 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 TYRP1P17643 537 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 FEN1P39748 380 aaKnown RBP16.71■□□□□ 0.27
LMNA-208ENST00000448611 FASLGP48023 281 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 TNFRSF17Q02223 184 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 RUNX2Q13950 521 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 ARL14Q8N4G2 192 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 SFXN5Q8TD22 340 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 LMX1AQ8TE12 382 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 TMEM19Q96HH6 336 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 SLC35G5Q96KT7 338 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 MIR1-1HGQ9H1L0 117 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 SEMA3GQ9NS98 782 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 FAM118AQ9NWS6 357 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 NDUFAF4Q9P032 175 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 PHF11Q9UIL8 331 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 RAB23Q9ULC3 237 aa16.71■□□□□ 0.27
LMNA-208ENST00000448611 MRPS2Q9Y399 296 aaKnown RBP16.71■□□□□ 0.27
LMNA-208ENST00000448611 SAMHD1Q9Y3Z3 626 aaKnown RBP16.71■□□□□ 0.27
LMNA-208ENST00000448611 ZSCAN9O15535 394 aaPredicted RBP16.7■□□□□ 0.26
LMNA-208ENST00000448611 ALPPL2P10696 532 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 TNFRSF1BP20333 461 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 PTGER1P34995 402 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 RXRGP48443 463 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 ARHGDIAP52565 204 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 LIM2P55344 173 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 LAPTM4AQ15012 233 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 GPR19Q15760 415 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 KCTD21Q4G0X4 260 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 LIN52Q52LA3 116 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 RPS26P11Q5JNZ5 115 aaPredicted RBP16.7■□□□□ 0.26
LMNA-208ENST00000448611 MANEAQ5SRI9 462 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 ARMC6Q6NXE6 501 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 TTC33Q6PID6 262 aaPredicted RBP16.7■□□□□ 0.26
LMNA-208ENST00000448611 ABHD13Q7L211 337 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 GKN2Q86XP6 184 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 ARMC8Q8IUR7 673 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 TSPAN14Q8NG11 270 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 MUS81Q96NY9 551 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 FAM192AQ9GZU8 254 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 OR51I1Q9H343 314 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 REEP1Q9H902 201 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 CLK4Q9HAZ1 481 aaKnown RBP16.7■□□□□ 0.26
LMNA-208ENST00000448611 THSD1Q9NS62 852 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 THUMPD1Q9NXG2 353 aaKnown RBP16.7■□□□□ 0.26
LMNA-208ENST00000448611 C3orf18Q9UK00 162 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 TDRD6O60522 2096 aaKnown RBP16.7■□□□□ 0.26
LMNA-208ENST00000448611 C5orf58C9J3I9 102 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 DNAJB6O75190 326 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 ATP6V1B1P15313 513 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 ALOX12P18054 663 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 BCKDHBP21953 392 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 CPN2P22792 545 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 MPIP34949 423 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 BUD31P41223 144 aaPredicted RBP16.7■□□□□ 0.26
LMNA-208ENST00000448611 RPL5P46777 297 aaKnown RBP16.7■□□□□ 0.26
LMNA-208ENST00000448611 OR1E2P47887 323 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 NXPH1P58417 271 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 KCNAB2Q13303 367 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 ZC3H12BQ5HYM0 836 aaKnown RBP16.7■□□□□ 0.26
LMNA-208ENST00000448611 TTC23Q5W5X9 447 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 CYP4Z1Q86W10 505 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 ZNF786Q8N393 782 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 AVL9Q8NBF6 648 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 SEMA6CQ9H3T2 930 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 GIMAP4Q9NUV9 329 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 PSME2Q9UL46 239 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 DAPP1Q9UN19 280 aa16.7■□□□□ 0.26
LMNA-208ENST00000448611 PRAMEF27A3QJZ7 478 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 TRIM64A6NGJ6 449 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 K7ESF4 209 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 B3GALT2O43825 422 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 EIF2S1P05198 315 aaKnown RBP16.69■□□□□ 0.26
LMNA-208ENST00000448611 ST6GAL1P15907 406 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 PIGAP37287 484 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 MAGEA8P43361 318 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 SIGLEC14Q08ET2 396 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 RFX4Q33E94 735 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 TMEM107Q6UX40 140 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 SZRD1Q7Z422 152 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 ZNF655Q8N720 491 aaPredicted RBP16.69■□□□□ 0.26
LMNA-208ENST00000448611 SMYD1Q8NB12 490 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 GEMIN6Q8WXD5 167 aaKnown RBP16.69■□□□□ 0.26
LMNA-208ENST00000448611 EDAQ92838 391 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 MAGED4Q96JG8 741 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 SPACA7Q96KW9 195 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 CSF3RQ99062 836 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 EPYCQ99645 322 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 UCK1Q9HA47 277 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 PRDM9Q9NQV7 894 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 TMEM74BQ9NUR3 256 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 PDP1Q9P0J1 537 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms