RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 UPK3BL2E5RIL1 263 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 SPAM1P38567 509 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 HTR3AP46098 478 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 RGS19P49795 217 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 DAPP51397 102 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZBTB37Q5TC79 503 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 KLHL24Q6TFL4 600 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 OR10K1Q8NGX5 313 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 GPR152Q8TDT2 470 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ADAMTS19Q8TE59 1207 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 COL26A1Q96A83 441 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 NECAB3Q96P71 396 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 SPEF2Q9C093 1822 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TTLL8A6PVC2 850 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 DRD5P21918 477 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 RPS19P39019 145 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 SNRPGP62308 76 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 GHRHRQ02643 423 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 NPWQ8N729 165 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 OR4K1Q8NGD4 311 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 OR52P1PQ8NH57 321 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 FUBP1Q96AE4 644 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 UBXN7O94888 489 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 C22orf31O95567 290 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 EDNRAP25101 427 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TAS2R43P59537 309 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 LILRA4P59901 499 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 WDR5P61964 334 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 RPS26P62854 115 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 TAF10Q12962 218 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 C18orf21Q32NC0 220 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 NOMO2Q5JPE7 1267 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TCTE1Q5JU00 501 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 FAM171BQ6P995 826 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TP53INP2Q8IXH6 220 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TM6SF2Q9BZW4 377 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ACOXLQ9NUZ1 547 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 GTDC1Q4AE62 458 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 OR2L2Q8NH16 312 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 CRTAC1Q9NQ79 661 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 MRTO4Q9UKD2 239 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 FAM170BA6NMN3 283 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 SCG5P05408 212 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 CD68P34810 354 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 RGS1Q08116 209 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 MFSD10Q14728 455 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 C7orf50Q9BRJ6 194 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZFYVE1Q9HBF4 777 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 VAPAQ9P0L0 249 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 GNG8Q9UK08 70 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ACSL6Q9UKU0 697 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ABHD14A-ACY1A0A1B0GW23 586 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 EIF2S3P41091 472 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 MAPK9P45984 424 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TRAM2Q15035 370 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 FAM122BQ7Z309 247 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZER1Q7Z7L7 766 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZNF227Q86WZ6 799 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 FBXO15Q8NCQ5 510 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 FKBP10Q96AY3 582 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 C10orf90Q96M02 699 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 OR51I1Q9H343 314 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 DUSP21Q9H596 190 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 SCPEP1Q9HB40 452 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 EVLQ9UI08 416 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 FARSAQ9Y285 508 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 SAP18O00422 153 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZNF254O75437 659 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ATP5C1P36542 298 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 MLLT6P55198 1093 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 GALK2Q01415 458 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 CD276Q5ZPR3 534 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 NR4A3Q92570 626 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 KIAA1143Q96AT1 154 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 SFXN2Q96NB2 322 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 SRRQ9GZT4 340 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 AOC2O75106 756 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CH25HO95992 272 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PTBP1P26599 531 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMG1-202ENST00000446231 CLCNKBP51801 687 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 TAS2R50P59544 299 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 Q6ZPB1 254 aaPredicted RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 ACBD4Q8NC06 268 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 RNF31Q96EP0 1072 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 MAOAP21397 527 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 RAB5CP51148 216 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CRISP3P54108 245 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 ATXN7L2Q5T6C5 722 aaPredicted RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 C1orf52Q8N6N3 182 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 PPTC7Q8NI37 304 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 RAET1EQ8TD07 263 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 IMP4Q96G21 291 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 SYNDIG1Q9H7V2 258 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 TREX1Q9NSU2 369 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 USP22Q9UPT9 525 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 TACSTD2P09758 323 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 RBMS1P29558 406 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 ZNF467Q7Z7K2 595 aaPredicted RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 PELI3Q8N2H9 469 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms