RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 A0A0G2JMP0 313 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 A0A0X1KG70 313 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 E7ENX8 843 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 LIN7AO14910 233 aaPredicted RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 ERLIN1O75477 346 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 ZFPL1O95159 310 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 IGHA1P01876 353 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 ALDOAP04075 364 aaKnown RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 HLA-DQB2P05538 268 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 PKMP14618 531 aaKnown RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 DDX5P17844 614 aaKnown RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 ARNTP27540 789 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 CMPK1P30085 196 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 ANP32AP39687 249 aaKnown RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 STARP49675 285 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 ZNF165P49910 485 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 PKP1Q13835 747 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 BRD3Q15059 726 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 GUSBP1Q15486 140 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 PPP6R3Q5H9R7 873 aaPredicted RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 FAM214BQ7L5A3 538 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 RNF144BQ7Z419 303 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 CCDC25Q86WR0 208 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 FAM71AQ8IYT1 594 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 BCL6BQ8N143 479 aaPredicted RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 FAM83FQ8NEG4 500 aaPredicted RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 OR4M2Q8NGB6 313 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 OR5T3Q8NGG3 340 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 CPA5Q8WXQ8 436 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 SMYD2Q9NRG4 433 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 PNO1Q9NRX1 252 aaKnown RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 PCDHB14Q9Y5E9 798 aa6.3□□□□□ -1.4
SSXP3-201ENST00000442971 CHCHD2Q9Y6H1 151 aaPredicted RBP6.3□□□□□ -1.4
SSXP3-201ENST00000442971 ZNF860A6NHJ4 632 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 E9PQ18 207 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 J3QLI3 93 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 POLR2DO15514 142 aaKnown RBP6.29□□□□□ -1.4
SSXP3-201ENST00000442971 OIP5O43482 229 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 SFTPBP07988 381 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 KRT3P12035 628 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 IFNGR1P15260 489 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 ARL4AP40617 200 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 HCAR3P49019 387 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 KHKP50053 298 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 ANAPC15P60006 121 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 RIN1Q13671 783 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 TSC22D1Q15714 1073 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 IFI16Q16666 785 aaKnown RBP6.29□□□□□ -1.4
SSXP3-201ENST00000442971 FNDC7Q5VTL7 733 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 PGBD2Q6P3X8 592 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 GJB7Q6PEY0 223 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 SLC22A25Q6T423 547 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 TMCO3Q6UWJ1 677 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 B3GLCTQ6Y288 498 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 CHMP1BQ7LBR1 199 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 SPATA6LQ8N4H0 392 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 FAM13CQ8NE31 585 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 CLDND2Q8NHS1 167 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 LINC01006Q8NI28 216 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 FIG4Q92562 907 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 VRK1Q99986 396 aaPredicted RBP6.29□□□□□ -1.4
SSXP3-201ENST00000442971 HDHD5Q9BXW7 423 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 RNF122Q9H9V4 155 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 ETNK2Q9NVF9 386 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 CWC15Q9P013 229 aaKnown RBP6.29□□□□□ -1.4
SSXP3-201ENST00000442971 ZNF69Q9UC07 566 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 PCYOX1Q9UHG3 505 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 CNOT11Q9UKZ1 510 aaKnown RBP6.29□□□□□ -1.4
SSXP3-201ENST00000442971 SMC3Q9UQE7 1217 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 NAALAD2Q9Y3Q0 740 aa6.29□□□□□ -1.4
SSXP3-201ENST00000442971 BUD23O43709 281 aaKnown RBP6.28□□□□□ -1.4
SSXP3-201ENST00000442971 GSTM1P09488 218 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 DAOP14920 347 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 PTPN3P26045 913 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 NTF4P34130 210 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 LHX2P50458 406 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 GSTM4Q03013 218 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 DCTN2Q13561 401 aaKnown RBP6.28□□□□□ -1.4
SSXP3-201ENST00000442971 KBTBD12Q3ZCT8 623 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 PIGGQ5H8A4 983 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 NKAPLQ5M9Q1 402 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 PPP4R4Q6NUP7 873 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 CES3Q6UWW8 571 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 Q6ZSR9 355 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 SATL1Q86VE3 508 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 OR10G3Q8NGC4 313 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 SPACA9Q96E40 222 aaPredicted RBP6.28□□□□□ -1.4
SSXP3-201ENST00000442971 PDLIM2Q96JY6 352 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 COPS8Q99627 209 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 FICDQ9BVA6 458 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 ACAT2Q9BWD1 397 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 VPS16Q9H269 839 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 ZDHHC3Q9NYG2 299 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 ALMS1Q8TCU4 4167 aa6.28□□□□□ -1.4
SSXP3-201ENST00000442971 PLECQ15149 4684 aaKnown RBP6.28□□□□□ -1.4
SSXP3-201ENST00000442971 IGKV1-8A0A0C4DH67 115 aa6.27□□□□□ -1.41
SSXP3-201ENST00000442971 GOLGA8QA0A0J9YX86 632 aa6.27□□□□□ -1.41
SSXP3-201ENST00000442971 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
SSXP3-201ENST00000442971 A0A1W2PPV9 198 aa6.27□□□□□ -1.41
SSXP3-201ENST00000442971 GOLGA8OA6NCC3 632 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms