RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 IL1RL2Q9HB29 575 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 PALMDQ9NP74 551 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 SEMA4BQ9NPR2 832 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 FAM118AQ9NWS6 357 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 GID8Q9NWU2 228 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF624Q9P2J8 865 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 LEF1Q9UJU2 399 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 ANAPC2Q9UJX6 822 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF232Q9UNY5 417 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 FARSAQ9Y285 508 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 PTPRQQ9UMZ3 2332 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF860A6NHJ4 632 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 NDUFS4O43181 175 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 PRAMEF10O60809 474 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 SERPINB7O75635 380 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 STK16O75716 305 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 G6PDP11413 515 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 TTKP33981 857 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 YAP1P46937 504 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 RPS3AP61247 264 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 DCDP81605 110 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 PWP1Q13610 501 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ABRAXAS2Q15018 415 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 AGERQ15109 404 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 MOGQ16653 247 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 RUNDC3AQ59EK9 446 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CYP20A1Q6UW02 462 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 GPR141Q7Z602 305 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 BTLAQ7Z6A9 289 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 MFSD4AQ8N468 514 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 C19orf47Q8N9M1 422 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 LMNTD1Q8N9Z9 388 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZFPM2Q8WW38 1151 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 AURKBQ96GD4 344 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 RBCK1Q9BYM8 510 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CHST8Q9H2A9 424 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CPNE5Q9HCH3 593 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 DNAJC11Q9NVH1 559 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ALKBH4Q9NXW9 302 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF749O43361 778 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 JRKO75564 520 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 MLYCDO95822 493 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CD1CP29017 333 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 RANBP1P43487 201 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 OR1D4P47884 311 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 EMP2P54851 167 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 AP1S2P56377 157 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 RAB8AP61006 207 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 STXBP1P61764 594 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 HYAL2Q12891 473 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC13A2Q13183 592 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 DAG1Q14118 895 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CPSF6Q16630 551 aaKnown RBP eCLIP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CYP51A1Q16850 503 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 BCL7AQ4VC05 210 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF691Q5VV52 312 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 PEAR1Q5VY43 1037 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 SPESP1Q6UW49 350 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 TSEN54Q7Z6J9 526 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CCDC71Q8IV32 467 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZC3H7AQ8IWR0 971 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 SRFBP1Q8NEF9 429 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 HDAC2Q92769 488 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 GFM2Q969S9 779 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 TMBIM1Q969X1 311 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ESAMQ96AP7 390 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 REPS1Q96D71 796 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 YIPF6Q96EC8 236 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CGREF1Q99674 301 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZFYVE21Q9BQ24 234 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 SCHIP1Q9P0W5 487 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 DHRS7Q9Y394 339 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 COL4A3Q01955 1670 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 REV3LO60673 3130 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 GNG14A0A1W2PPG7 69 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 MEN1O00255 615 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 GPC4O75487 556 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CDC123O75794 336 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 OR4F21O95013 312 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 C9P02748 559 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CBSLP0DN79 551 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ST6GAL1P15907 406 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 PNLIPP16233 465 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 UGT2B7P16662 529 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 RPS3P23396 243 aaKnown RBP eCLIP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CD82P27701 267 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ITPKBP27987 946 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CBSP35520 551 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 HSPA7P48741 367 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 SPCS2Q15005 226 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 CLPPQ16740 277 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 RBM48Q5RL73 367 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 TTC33Q6PID6 262 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 GOLGA7Q7Z5G4 137 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF554Q86TJ5 538 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 TMEM156Q8N614 296 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 TRIML2Q8N7C3 387 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 TRUB1Q8WWH5 349 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 MTFMTQ96DP5 389 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 COX14Q96I36 57 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms