RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 LEXMQ3ZCV2 418 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 C12orf73Q69YU5 71 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 CEACAM20Q6UY09 585 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 PARS2Q7L3T8 475 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 CLIP4Q8N3C7 705 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 HORMAD2Q8N7B1 307 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 CELF2-AS1Q8N7Q2 184 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 FLCNQ8NFG4 579 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 IL17RDQ8NFM7 739 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 GPR32P1Q8NGA4 272 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 SMARCD2Q92925 531 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 DTD2Q96FN9 168 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 COQ10AQ96MF6 247 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 KCNS3Q9BQ31 491 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 SORBS1Q9BX66 1292 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 RACGAP1Q9H0H5 632 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 MOV10Q9HCE1 1003 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 KLHL3Q9UH77 587 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 TRIOBPQ9H2D6 2365 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 A8MU76 341 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 PDZK1P1A8MUH7 402 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 BCHEP06276 602 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 ELAVL4P26378 380 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 TIE1P35590 1138 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 NNMTP40261 264 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 DHCR24Q15392 516 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 SEC23BQ15437 767 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF362Q5T0B9 420 aaPredicted RBP15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 TMEM184AQ6ZMB5 413 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 SLC9B2Q86UD5 537 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 SLC38A5Q8WUX1 472 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 PPP1R16AQ96I34 528 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 ZFYVE19Q96K21 471 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 CEP19Q96LK0 163 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 IL4I1Q96RQ9 567 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 SLAMF7Q9NQ25 335 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 DYRK4Q9NR20 520 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 MARK1Q9P0L2 795 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 TMCC3Q9ULS5 477 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 MGAT4BQ9UQ53 548 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 SNX8Q9Y5X2 465 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 PRUNE2Q8WUY3 3088 aa15.57■□□□□ 0.08
CLCNKA-203ENST00000439316 H3BQ06 376 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 FAAHO00519 579 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SSX4O60224 188 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SEMA7AO75326 666 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 CSO75390 466 aaKnown RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SLITRK5O94991 958 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 OPRD1P41143 372 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 DGKEP52429 567 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 RPS26P62854 115 aaKnown RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 AGAP6Q5VW22 663 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 ANKRD54Q6NXT1 300 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 TMIGD1Q6UXZ0 262 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 GDPGP1Q6ZNW5 385 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 KRT73Q86Y46 540 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 TRAPPC5Q8IUR0 188 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SETD7Q8WTS6 366 aaKnown RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 KLHL6Q8WZ60 621 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 OR5P2Q8WZ92 322 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 TMEM19Q96HH6 336 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 AGAP4Q96P64 663 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 ASPNQ9BXN1 380 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 RSPO3Q9BXY4 272 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 ZCCHC2Q9C0B9 1178 aaKnown RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 OR2AG1Q9H205 316 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 NPAP1Q9NZP6 1156 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 TBC1D24Q9ULP9 559 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 RBMX2Q9Y388 322 aaKnown RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 C5orf58C9J3I9 102 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SPINT1O43278 529 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 TBX19O60806 448 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 MFN2O95140 757 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 CYP17A1P05093 508 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 DDCP20711 480 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 TNFSF8P32971 234 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 DGKGP49619 791 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 FOXD4Q12950 439 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 PRAMEF14Q5SWL7 426 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 PRAMEF13Q5VWM6 474 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 RNLSQ5VYX0 342 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 TCTN3Q6NUS6 607 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 TNFAIP8L2Q6P589 184 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SPATC1Q76KD6 591 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 FAM129CQ86XR2 697 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 ADGRF3Q8IZF5 1079 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SETD6Q8TBK2 473 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 TMEM80Q96HE8 168 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SLC6A18Q96N87 628 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 OR2A14Q96R47 310 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 CNPPD1Q9BV87 410 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF717Q9BY31 904 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SIAEQ9HAT2 523 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 DNAJC27Q9NZQ0 273 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 SEC14L4Q9UDX3 406 aa15.56■□□□□ 0.08
CLCNKA-203ENST00000439316 CACNB4O00305 520 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 PI15O43692 258 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 SOX14O95416 240 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 ACADLP28330 430 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 RPS19P39019 145 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms