RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ZNF19P17023 458 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 NOVP48745 357 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 TRAM2Q15035 370 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 C1orf220Q5T0J3 134 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 IL20RBQ6UXL0 311 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 OR2L2Q8NH16 312 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 ARL5BQ96KC2 179 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 IL4I1Q96RQ9 567 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 SLC22A12Q96S37 553 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 MACROD1Q9BQ69 325 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 TTYH2Q9BSA4 534 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 TTTY10Q9BZA0 68 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 SLC7A11Q9UPY5 501 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 RPL36Q9Y3U8 105 aaKnown RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.54□□□□□ -0.56
NEK1-201ENST00000439128 PDHA2P29803 388 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 GCH1P30793 250 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 SLC9A3P48764 834 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 GPR143P51810 404 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 SLC18A2Q05940 514 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 QPRTQ15274 297 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 C18orf21Q32NC0 220 aaPredicted RBP11.54□□□□□ -0.56
NEK1-201ENST00000439128 IQCCQ4KMZ1 466 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 CRTC2Q53ET0 693 aaPredicted RBP11.54□□□□□ -0.56
NEK1-201ENST00000439128 LHX8Q68G74 356 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 OR13H1Q8NG92 308 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 SIGLEC10Q96LC7 697 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 BMFQ96LC9 184 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 RNPEPL1Q9HAU8 725 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 POT1Q9NUX5 634 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 BOKQ9UMX3 212 aaPredicted RBP11.54□□□□□ -0.56
NEK1-201ENST00000439128 ALS2Q96Q42 1657 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 RAB36O95755 333 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 ZNF35P13682 527 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 XRCC1P18887 633 aaPredicted RBP11.54□□□□□ -0.56
NEK1-201ENST00000439128 IL32P24001 234 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 SDC2P34741 201 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 GPX6P59796 221 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 ARMC10Q8N2F6 343 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 CBR4Q8N4T8 237 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 AQP11Q8NBQ7 271 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 OR8S1Q8NH09 359 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 CLK4Q9HAZ1 481 aaKnown RBP11.54□□□□□ -0.56
NEK1-201ENST00000439128 MMP17Q9ULZ9 603 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 PDE10AQ9Y233 779 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 SH3PXD2BA1X283 911 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 NOS1APO75052 506 aaPredicted RBP11.54□□□□□ -0.56
NEK1-201ENST00000439128 ZNF43P17038 809 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 SDHBP21912 280 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 DCDP81605 110 aaKnown RBP11.54□□□□□ -0.56
NEK1-201ENST00000439128 MLC1Q15049 377 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 UEVLDQ8IX04 471 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 LINC00471Q8N535 108 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 HSH2DQ96JZ2 352 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 MSLNLQ96KJ4 702 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 PCDHB16Q9NRJ7 776 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 ABCB10Q9NRK6 738 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 PADI1Q9ULC6 663 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 BMP4P12644 408 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 HSD3B1P14060 373 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 HSD3B2P26439 372 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 ALDH3A2P51648 485 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 OR1D5P58170 312 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 NPRL3Q12980 569 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 ERV3-1Q14264 604 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 PKDCCQ504Y2 493 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 KRTCAP2Q8N6L1 136 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 NR4A3Q92570 626 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 PGAM5Q96HS1 289 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 ALPK1Q96QP1 1244 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 HOXD1Q9GZZ0 328 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 THSD1Q9NS62 852 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 PCDH10Q9P2E7 1040 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 RGPD1P0DJD0 1748 aa11.54□□□□□ -0.56
NEK1-201ENST00000439128 ZFAND5O76080 213 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 PRKD3O94806 890 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 KDM4BO94953 1096 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 AK1P00568 194 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 EEFSECP57772 596 aaKnown RBP11.53□□□□□ -0.56
NEK1-201ENST00000439128 TAS2R38P59533 333 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 RPS26P62854 115 aaKnown RBP11.53□□□□□ -0.56
NEK1-201ENST00000439128 RPE65Q16518 533 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 IDNKQ5T6J7 187 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 NDUFAF5Q5TEU4 345 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 ZNF440Q8IYI8 595 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 PSMA8Q8TAA3 256 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 TCTN2Q96GX1 697 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 C6orf106Q9H6K1 298 aaPredicted RBP11.53□□□□□ -0.56
NEK1-201ENST00000439128 CWH43Q9H720 699 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 SLX4Q8IY92 1834 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 A0A1W2PRQ8 180 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 SOX14O95416 240 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 HTR1AP08908 422 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 DNAJB1P25685 340 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 TTKP33981 857 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 ADAM8P78325 824 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 OCLNQ16625 522 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 FRMD7Q6ZUT3 714 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 FIZ1Q96SL8 496 aa11.53□□□□□ -0.56
NEK1-201ENST00000439128 S100A14Q9HCY8 104 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms