RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 RNH1P13489 461 aaKnown RBP9.87□□□□□ -0.83
RTN4-211ENST00000438462 CHRM3P20309 590 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 PSMB1P20618 241 aaKnown RBP9.87□□□□□ -0.83
RTN4-211ENST00000438462 OMGP23515 440 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 ADH6P28332 368 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 FOXN2P32314 431 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 MTIF2P46199 727 aaKnown RBP9.87□□□□□ -0.83
RTN4-211ENST00000438462 SKP1P63208 163 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 GUSBP1Q15486 140 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 TSC22D1Q15714 1073 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 ELAVL1Q15717 326 aaKnown RBP9.87□□□□□ -0.83
RTN4-211ENST00000438462 TEX44Q53QW1 395 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 ZNF793Q6ZN11 406 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 TMEM132CQ8N3T6 1108 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 SLC13A3Q8WWT9 602 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 C22orf15Q8WYQ4 148 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 GTF3AQ92664 365 aaKnown RBP9.87□□□□□ -0.83
RTN4-211ENST00000438462 RUNDC3BQ96NL0 473 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 SORCS2Q96PQ0 1159 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 DHRS9Q9BPW9 319 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 GATA5Q9BWX5 397 aaPredicted RBP9.87□□□□□ -0.83
RTN4-211ENST00000438462 SAP130Q9H0E3 1048 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 RNF122Q9H9V4 155 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 NKX1-2Q9UD57 310 aaPredicted RBP9.87□□□□□ -0.83
RTN4-211ENST00000438462 PTBP2Q9UKA9 531 aaKnown RBP9.87□□□□□ -0.83
RTN4-211ENST00000438462 CFAP45Q9UL16 551 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 CLCA3PQ9Y6N3 262 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 PLXNB1O43157 2135 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 NPIPA5A0A0B4J1W7 369 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 ANKRD33BA6NCL7 494 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 IQCF5A8MTL0 148 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 NPIPA7E9PJI5 369 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 OR1I1O60431 355 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 CRTAMO95727 393 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 AGTP01019 485 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 APOA4P06727 396 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 NPIPA8P0DM63 369 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 ZNF708P17019 499 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 ALOX12P18054 663 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 ABATP80404 500 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 P2RY6Q15077 328 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 ZNHIT3Q15649 155 aaPredicted RBP9.86□□□□□ -0.83
RTN4-211ENST00000438462 FAM214BQ7L5A3 538 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 PACS2Q86VP3 889 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 SYT14Q8NB59 555 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 MORN4Q8NDC4 146 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 STEAP2Q8NFT2 490 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 OR14L1PQ8NHC6 308 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 PIWIL2Q8TC59 973 aaKnown RBP9.86□□□□□ -0.83
RTN4-211ENST00000438462 ZNF670Q9BS34 389 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 TRMOQ9BU70 441 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 ZMAT3Q9HA38 289 aaKnown RBP9.86□□□□□ -0.83
RTN4-211ENST00000438462 LPAR2Q9HBW0 351 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 MYOZ1Q9NP98 299 aaPredicted RBP9.86□□□□□ -0.83
RTN4-211ENST00000438462 FANCFQ9NPI8 374 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 ZDHHC2Q9UIJ5 367 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 R3HDM2Q9Y2K5 976 aaKnown RBP9.86□□□□□ -0.83
RTN4-211ENST00000438462 HEY1Q9Y5J3 304 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 MMP24Q9Y5R2 645 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 MRFAP1Q9Y605 127 aa9.86□□□□□ -0.83
RTN4-211ENST00000438462 TMCO5BA8MYB1 307 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 SMAPO00193 183 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 NDUFS4O43181 175 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 CEP104O60308 925 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 AVPP01185 164 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 ALDOAP04075 364 aaKnown RBP9.85□□□□□ -0.83
RTN4-211ENST00000438462 IFNA16P05015 189 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 ZNF888P0CJ79 500 aaPredicted RBP9.85□□□□□ -0.83
RTN4-211ENST00000438462 GJC1P36383 396 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 FABP6P51161 128 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 GFRA1P56159 465 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 JAM2P57087 298 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.85□□□□□ -0.83
RTN4-211ENST00000438462 CAPN13Q6MZZ7 669 aaPredicted RBP9.85□□□□□ -0.83
RTN4-211ENST00000438462 UGT2A3Q6UWM9 527 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 CHMP1BQ7LBR1 199 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 IFNEQ86WN2 208 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 DND1Q8IYX4 353 aaKnown RBP9.85□□□□□ -0.83
RTN4-211ENST00000438462 TEX29Q8N6K0 151 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 SIGLECL1Q8N7X8 197 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 SLC2A12Q8TD20 617 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 DAZLQ92904 295 aaKnown RBP9.85□□□□□ -0.83
RTN4-211ENST00000438462 LRRC58Q96CX6 371 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 THAP11Q96EK4 314 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 C1orf147Q96MC9 270 aaPredicted RBP9.85□□□□□ -0.83
RTN4-211ENST00000438462 TIGD1Q96MW7 591 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 LRRC37BQ96QE4 947 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 PRTFDC1Q9NRG1 225 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
RTN4-211ENST00000438462 CAPN11Q9UMQ6 739 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 ZNF148Q9UQR1 794 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 PLCE1Q9P212 2302 aa9.85□□□□□ -0.83
RTN4-211ENST00000438462 MYOCOSA0A1B0GUC4 107 aa9.84□□□□□ -0.83
RTN4-211ENST00000438462 SNX4O95219 450 aa9.84□□□□□ -0.83
RTN4-211ENST00000438462 PNPP00491 289 aa9.84□□□□□ -0.83
RTN4-211ENST00000438462 RNASE1P07998 156 aaKnown RBP9.84□□□□□ -0.83
RTN4-211ENST00000438462 BMP4P12644 408 aa9.84□□□□□ -0.83
RTN4-211ENST00000438462 CDK11BP21127 795 aaKnown RBP9.84□□□□□ -0.83
RTN4-211ENST00000438462 SERPINB3P29508 390 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms