RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 UBAC1Q9BSL1 405 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 OSBPL10Q9BXB5 764 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 MIS12Q9H081 205 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 HSD3B7Q9H2F3 369 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 UBQLN3Q9H347 655 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 ACTL8Q9H568 366 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 MAGEF1Q9HAY2 307 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 DMAP1Q9NPF5 467 aaPredicted RBP3.77□□□□□ -1.81
HMGB3-203ENST00000430118 OLFML3Q9NRN5 406 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 NDUFA13Q9P0J0 144 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 TRMT6Q9UJA5 497 aaKnown RBP3.77□□□□□ -1.81
HMGB3-203ENST00000430118 TSPAN16Q9UKR8 245 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 NDRG2Q9UN36 371 aaKnown RBP3.77□□□□□ -1.81
HMGB3-203ENST00000430118 C15orf41Q9Y2V0 281 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 NOSIPQ9Y314 301 aaKnown RBP3.77□□□□□ -1.81
HMGB3-203ENST00000430118 SH3GLB1Q9Y371 365 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 BZW2Q9Y6E2 419 aaKnown RBP3.77□□□□□ -1.81
HMGB3-203ENST00000430118 LAMA5O15230 3695 aa3.77□□□□□ -1.81
HMGB3-203ENST00000430118 FASNP49327 2511 aaKnown RBP3.77□□□□□ -1.81
HMGB3-203ENST00000430118 CNTNAP2Q9UHC6 1331 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 SETXQ7Z333 2677 aaKnown RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 A0A1W2PN81 502 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 SMIM30A4D0T7 59 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 F8VVB4 439 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 F8VWA3 439 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 NPIPA3F8WFD2 350 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 BOLA2-SMG1P6H3BVE0 249 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 NDC80O14777 642 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CTDSPLO15194 276 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 EIF3HO15372 352 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 LDB3O75112 727 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 N4BP1O75113 896 aaKnown RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 ECI2O75521 394 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 RHOBTB1O94844 696 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 TOMM40O96008 361 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 GSRP00390 522 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 ABHD2P08910 425 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 PSG1P11464 419 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 DAOP14920 347 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CPA3P15088 417 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 LBPP18428 481 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 POLR2EP19388 210 aaKnown RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CYP2A7P20853 494 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 S100A1P23297 94 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 PIK3R1P27986 724 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 HOXA9P31269 272 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 KIF5BP33176 963 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CHRNA7P36544 502 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 ARCN1P48444 511 aaKnown RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 GPC3P51654 580 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CASP9P55211 416 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 UBE2HP62256 183 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 MRPS25P82663 173 aaKnown RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 HTD2P86397 168 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 BNC1Q01954 994 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 AKAP17AQ02040 695 aaKnown RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CACNG1Q06432 222 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 IL10RBQ08334 325 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 XRCC4Q13426 336 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 HNRNPDQ14103 355 aaKnown RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 VEZF1Q14119 521 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 SPCS2Q15005 226 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 RBBP7Q16576 425 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 PHKG1Q16816 387 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 ODF4Q2M2E3 257 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CFAP157Q5JU67 520 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 PPM1LQ5SGD2 360 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 MARCH8Q5T0T0 291 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 TWF2Q6IBS0 349 aaKnown RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 NEPROQ6NW34 567 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 PODNL1Q6PEZ8 512 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 PLXDC2Q6UX71 529 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 GFRALQ6UXV0 394 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 TECPR1Q7Z6L1 1165 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 FJX1Q86VR8 437 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 FAM228AQ86W67 206 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 TMEM219Q86XT9 240 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 LRRC8AQ8IWT6 810 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CFAP206Q8IYR0 622 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 SAMD14Q8IZD0 417 aaPredicted RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 ARHGAP18Q8N392 663 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 PGBD5Q8N414 524 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 SFRP1Q8N474 314 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 SPEM1Q8N4L4 309 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 METTL13Q8N6R0 699 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 NOA1Q8NC60 698 aaKnown RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CCDC110Q8TBZ0 833 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 ST7LQ8TDW4 575 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CTNNBL1Q8WYA6 563 aaPredicted RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 FAM3CQ92520 227 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 FGF14Q92915 247 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 TMEM186Q96B77 213 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 AP2M1Q96CW1 435 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 PGM2Q96G03 612 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 SCMH1Q96GD3 660 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 FAM71F1Q96KD3 344 aaPredicted RBP3.76□□□□□ -1.81
HMGB3-203ENST00000430118 RASL10BQ96S79 203 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 KCNK16Q96T55 309 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 CSF3RQ99062 836 aa3.76□□□□□ -1.81
HMGB3-203ENST00000430118 DCTPP1Q9H773 170 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms