RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SLC7A2P52569 658 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC13A2Q13183 592 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 EXOSC7Q15024 291 aaKnown RBP8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 TRMT12Q53H54 448 aaKnown RBP8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 TMEM107Q6UX40 140 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 ABHD13Q7L211 337 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 TIPARPQ7Z3E1 657 aaKnown RBP8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 TTLQ8NG68 377 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 SUN3Q8TAQ9 357 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 PYDC1Q8WXC3 89 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 PPCDCQ96CD2 204 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 PANX1Q96RD7 426 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 REEP4Q9H6H4 257 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 RPF2Q9H7B2 306 aaKnown RBP8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 CXorf36Q9H7Y0 433 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 WDR41Q9HAD4 459 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 ADA2Q9NZK5 511 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 A0A1W2PP18 115 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 FAM234BA2RU67 622 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 NME4O00746 187 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 TM4SF5O14894 197 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 MT-CO3P00414 261 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 ACPPP15309 386 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 HRH2P25021 359 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 DUSP3P51452 185 aaPredicted RBP8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 FOXD4Q12950 439 aaPredicted RBP8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 CEACAM7Q14002 265 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 FOXB2Q5VYV0 432 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 C16orf47Q6ZP98 133 aaPredicted RBP8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 PPP1R3BQ86XI6 285 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 TBC1D19Q8N5T2 526 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 OR5D16Q8NGK9 328 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 CENPKQ9BS16 269 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 NDC1Q9BTX1 674 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 GLIPR2Q9H4G4 154 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 NECTIN3Q9NQS3 549 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 GPATCH2Q9NW75 528 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 CMTM6Q9NX76 183 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC39A1Q9NY26 324 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 DLL3Q9NYJ7 618 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 SERTAD3Q9UJW9 196 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 MAP4K5Q9Y4K4 846 aa8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 MRPS18BQ9Y676 258 aaKnown RBP8.95□□□□□ -0.98
HMGCLL1-206ENST00000428842 COL5A1P20908 1838 aaPredicted RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 SERTM1A2A2V5 107 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PRORSD1PA6NEY8 169 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 C9orf172C9J069 976 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 H3BNX3 289 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 SRPX2O60687 465 aaPredicted RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PRPS2P11908 318 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 DDCP20711 480 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PRPS1L1P21108 318 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 AQP1P29972 269 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 ADSLP30566 484 aaPredicted RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PGDP52209 483 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 NCBP2P52298 156 aaKnown RBP eCLIP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 NUBP1P53384 320 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 ART3Q13508 389 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 RSPO4Q2I0M5 234 aaPredicted RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 CYP27C1Q4G0S4 372 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 RNF220Q5VTB9 566 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 NANOGP8Q6NSW7 305 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 CYP2R1Q6VVX0 501 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 COX15Q7KZN9 410 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC44A2Q8IWA5 706 aaPredicted RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 OR4A15Q8NGL6 344 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 RP9Q8TA86 221 aaKnown RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 NETO1Q8TDF5 533 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC26A7Q8TE54 656 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 RAB8BQ92930 207 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 LRRC58Q96CX6 371 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 C16orf58Q96GQ5 468 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZNF285Q96NJ3 590 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 TSC22D3Q99576 134 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 FAM192AQ9GZU8 254 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PAIP1Q9H074 479 aaKnown RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 VCX3BQ9H321 246 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 NANOGQ9H9S0 305 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 MYNNQ9NPC7 610 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZIM2Q9NZV7 527 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 CES1P1Q9UKY3 287 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 RARRES3Q9UL19 164 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 MKL2Q9ULH7 1088 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PRPF19Q9UMS4 504 aaKnown RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 TMED5Q9Y3A6 229 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PCDHGB2Q9Y5G2 931 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 CLDN16Q9Y5I7 305 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC22A7Q9Y694 548 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 ACACBO00763 2458 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 RFXANKO14593 260 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PEX1O43933 1283 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 SEMA3DO95025 777 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 UBTFL6P0CB48 400 aaPredicted RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 NR2F6P10588 404 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC6A2P23975 617 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PEX19P40855 299 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 MC3RP41968 323 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 XKP51811 444 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 MS4A2Q01362 244 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms