RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	DSP	P15924	2871 aa	Known RBP	12.33	□□□□□ -0.44
SF1-206	ENST00000413725	LOC400499	M0QZD8	3231 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	MGA	Q8IWI9	3026 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	TGFBR3L	H3BV60	316 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	AKAP10	O43572	662 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	DYRK3	O43781	588 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	SEC24D	O94855	1032 aa	Predicted RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	LRAT	O95237	230 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	TNNI3	P19429	210 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	CSNK2A2	P19784	350 aa	Predicted RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	PRPS1L1	P21108	318 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	LSP1	P33241	339 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	STT3A	P46977	705 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	XK	P51811	444 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	GYS2	P54840	703 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	AP2B1	P63010	937 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	GNGT1	P63211	74 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	PTGR1	Q14914	329 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	PCOLCE	Q15113	449 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	RPS6KA2	Q15349	733 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	TERF2	Q15554	542 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	ELAVL1	Q15717	326 aa	Known RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	LSM12	Q3MHD2	195 aa	Known RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	C6orf163	Q5TEZ5	329 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	PAPD4	Q6PIY7	484 aa	Known RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	RIPOR1	Q6ZS17	1223 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	TICAM1	Q8IUC6	712 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	ST13P4	Q8IZP2	240 aa	Predicted RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	CLEC1A	Q8NC01	280 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	UCN3	Q969E3	161 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	GFM2	Q969S9	779 aa	Known RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	EXOSC8	Q96B26	276 aa	Known RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	PPCDC	Q96CD2	204 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	MTERF3	Q96E29	417 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	RBM18	Q96H35	190 aa	Known RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	ZNF764	Q96H86	408 aa	Predicted RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	OR52B2	Q96RD2	323 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	PRPF18	Q99633	342 aa	Known RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	NSRP1	Q9H0G5	558 aa	Known RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	SLC35C2	Q9NQQ7	365 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	AIG1	Q9NVV5	245 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	C5AR2	Q9P296	337 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	CES1P1	Q9UKY3	287 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	CLDN16	Q9Y5I7	305 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	CLCA3P	Q9Y6N3	262 aa		12.32	□□□□□ -0.44
SF1-206	ENST00000413725	TNRC6A	Q8NDV7	1962 aa	Known RBP	12.32	□□□□□ -0.44
SF1-206	ENST00000413725	IGHV3-20	A0A0C4DH32	117 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725		A0A0G2JND7	137 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	SAGE2P	A6NJ88	616 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	ARGFX	A6NJG6	315 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	WASHC1	A8K0Z3	465 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725		A8MUA0	341 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	SCAMP2	O15127	329 aa	Known RBP	12.31	□□□□□ -0.44
SF1-206	ENST00000413725	UBD	O15205	165 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	TBX19	O60806	448 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	ALDOC	P09972	364 aa	Known RBP	12.31	□□□□□ -0.44
SF1-206	ENST00000413725	SLC35E2	P0CK97	266 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	ICAM2	P13598	275 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	CPM	P14384	443 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	IDO1	P14902	403 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	POR	P16435	677 aa	Predicted RBP	12.31	□□□□□ -0.44
SF1-206	ENST00000413725	NTS	P30990	170 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	DIO3	P55073	304 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	CLDN8	P56748	225 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	AIMP2	Q13155	320 aa	Known RBP	12.31	□□□□□ -0.44
SF1-206	ENST00000413725	EXT1	Q16394	746 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	GSTA3	Q16772	222 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	DCAF10	Q5QP82	559 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	GPR155	Q7Z3F1	870 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	LRRC25	Q8N386	305 aa	Predicted RBP	12.31	□□□□□ -0.44
SF1-206	ENST00000413725	OR14A16	Q8NHC5	309 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	RFWD2	Q8NHY2	731 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	DAZL	Q92904	295 aa	Known RBP	12.31	□□□□□ -0.44
SF1-206	ENST00000413725	RILP	Q96NA2	401 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	BBS4	Q96RK4	519 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	EBF4	Q9BQW3	602 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	MESP1	Q9BRJ9	268 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	DPY30	Q9C005	99 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	ZNF160	Q9HCG1	818 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	ATP13A2	Q9NQ11	1180 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	ATAD3A	Q9NVI7	634 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	TAS2R7	Q9NYW3	318 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	SH3BP4	Q9P0V3	963 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	EPG5	Q9HCE0	2579 aa		12.31	□□□□□ -0.44
SF1-206	ENST00000413725	ZZEF1	O43149	2961 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	MYOCOS	A0A1B0GUC4	107 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	C17orf105	B2RV13	164 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725		E9PBE3	544 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	KLHL41	O60662	606 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	NT5E	P21589	574 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	GALNS	P34059	522 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	FEN1	P39748	380 aa	Known RBP	12.3	□□□□□ -0.44
SF1-206	ENST00000413725	CLNS1A	P54105	237 aa	Known RBP	12.3	□□□□□ -0.44
SF1-206	ENST00000413725	C21orf58	P58505	322 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	STX1B	P61266	288 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	IRX1	P78414	480 aa	Predicted RBP	12.3	□□□□□ -0.44
SF1-206	ENST00000413725	PDE7A	Q13946	482 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	IRAK1BP1	Q5VVH5	260 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	PLAG1	Q6DJT9	500 aa		12.3	□□□□□ -0.44
SF1-206	ENST00000413725	BORA	Q6PGQ7	559 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms