RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ALCAMQ13740 583 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SLBPQ14493 270 aaKnown RBP eCLIP4.99□□□□□ -1.61
HERC4-205ENST00000412272 HNF4GQ14541 408 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SNAPC1Q16533 368 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TFDP3Q5H9I0 405 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 DNLZQ5SXM8 178 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 C6orf141Q5SZD1 244 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SLC35F1Q5T1Q4 408 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ZNF468Q5VIY5 522 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 MAP1SQ66K74 1059 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 WASH2PQ6VEQ5 465 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SYVN1Q86TM6 617 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 RBM23Q86U06 439 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 RANBP3LQ86VV4 465 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 PLD3Q8IV08 490 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SLC41A1Q8IVJ1 513 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 DCUN1D3Q8IWE4 304 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SKA3Q8IX90 412 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TCEAL8Q8IYN2 117 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SELENOHQ8IZQ5 122 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 FAM156AQ8NDB6 213 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 KCNJ9Q92806 393 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CCDC90BQ9GZT6 254 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 IKZF4Q9H2S9 585 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CACNA2D2Q9NY47 1150 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 MED11Q9P086 117 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 RAPGEFL1Q9UHV5 662 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 PDE10AQ9Y233 779 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 LYVE1Q9Y5Y7 322 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 NRXN2Q9P2S2 1712 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 A0A075B6Q4 140 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 PRORSD1PA6NEY8 169 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 MID1O15344 667 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 PTCD1O75127 700 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 BANF1O75531 89 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CYP7B1O75881 506 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 POU2F2P09086 479 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 MYOGP15173 224 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 UBA1P22314 1058 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 CEACAM8P31997 349 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 DGKEP52429 567 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 RAB5BP61020 215 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 USF2Q15853 346 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 IL20RBQ6UXL0 311 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CASP12Q6UXS9 341 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SLC39A5Q6ZMH5 540 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 S100A7AQ86SG5 101 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CLEC14AQ86T13 490 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TRIM69Q86WT6 500 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SLC35F3Q8IY50 421 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CMTR2Q8IYT2 770 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 ANKRD52Q8NB46 1076 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ADPRHL1Q8NDY3 354 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 C17orf47Q8NEP4 570 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CHTF18Q8WVB6 975 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 KAT5Q92993 513 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 DMRTA2Q96SC8 542 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 C11orf54Q9H0W9 315 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 RIOX1Q9H6W3 641 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 NT5DC2Q9H857 520 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ZBTB20Q9HC78 741 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 DYRK4Q9NR20 520 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ASAH2Q9NR71 780 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 POT1Q9NUX5 634 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CD84Q9UIB8 345 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 MRPS2Q9Y399 296 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 ZNF451Q9Y4E5 1061 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 IRAK3Q9Y616 596 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CCDC195A0A1B0GUA6 201 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SLC5A10A0PJK1 596 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 OR2W5A6NFC9 320 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 F5H423 210 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 SYT5O00445 386 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 OR10H3O60404 316 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 GIMD1P0DJR0 217 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ETS1P14921 441 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SSTR2P30874 369 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 FEN1P39748 380 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 PTGER3P43115 390 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CLCN3P51790 818 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 FGF8P55075 233 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 BLOC1S1P78537 153 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TLE2Q04725 743 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CLINT1Q14677 625 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TRIM61Q5EBN2 209 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 C1orf220Q5T0J3 134 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 COL13A1Q5TAT6 717 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 MARC1Q5VT66 337 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TTC23Q5W5X9 447 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 BLOC1S3Q6QNY0 202 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CYHR1Q6ZMK1 362 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ZNF720Q7Z2F6 126 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TMCO2Q7Z6W1 182 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 GPR149Q86SP6 731 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 DDX53Q86TM3 631 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 STK40Q8N2I9 435 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 OR5T3Q8NGG3 340 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 OR5D18Q8NGL1 313 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 MAPK15Q8TD08 544 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms