RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PSMC1P62191 440 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 EEF1A1P68104 462 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 CXCL6P80162 114 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ACY1Q03154 408 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 KCNA1Q09470 495 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TROQ12816 1431 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 LCP2Q13094 533 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 BIKQ13323 160 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PTK6Q13882 451 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM53BQ14153 422 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 MYBPC2Q14324 1141 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TAB1Q15750 504 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 MAJINQ3KP22 176 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PLEKHG6Q3KR16 790 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ARL13AQ5H913 290 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 EEF1A1P5Q5VTE0 462 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 LYSMD4Q5XG99 296 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ARL6IP4Q66PJ3 421 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 MSANTD2Q6P1R3 559 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF562Q6V9R5 426 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 KRBA2Q6ZNG9 492 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PIK3AP1Q6ZUJ8 805 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 VN1R4Q7Z5H5 301 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM179BQ7Z7N9 219 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 RHPN2Q8IUC4 686 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCAR1Q8IX12 1150 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 RPAP2Q8IXW5 612 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 MUC15Q8N387 334 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TC2NQ8N9U0 490 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 SUMF2Q8NBJ7 301 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 C11orf72Q8NBR9 251 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PLPP5Q8NEB5 264 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR2T12Q8NG77 320 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR5B17Q8NGF7 314 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR6T1Q8NGN1 323 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR2I1PQ8NGU4 316 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 COQ8AQ8NI60 647 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM163Q8TC26 289 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 STT3BQ8TCJ2 826 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 UTP15Q8TED0 518 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAR1Q8WVX9 515 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM143Q96AN5 459 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 NMD3Q96D46 503 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PGAP3Q96FM1 320 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF486Q96H40 463 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 C10orf90Q96M02 699 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 NSMCE2Q96MF7 247 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF570Q96NI8 536 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 MAP7D2Q96T17 732 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 RSF1Q96T23 1441 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 CSF3RQ99062 836 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 HERC2P3Q9BVR0 1158 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 RAB34Q9BZG1 259 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ABCG5Q9H222 651 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ROPN1Q9HAT0 212 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TOMM22Q9NS69 142 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 DDX28Q9NUL7 540 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMLHEQ9NVH6 421 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 DNAJC17Q9NVM6 304 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 MTPAPQ9NVV4 582 aaKnown RBP eCLIP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ASNSD1Q9NWL6 643 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 SENP1Q9P0U3 644 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC23A2Q9UGH3 650 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCPG1Q9ULG6 757 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 FZR1Q9UM11 496 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PRPF19Q9UMS4 504 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PPIL1Q9Y3C6 166 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 ASXL1Q8IXJ9 1541 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 HEATR5BQ9P2D3 2071 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 DENND4BO75064 1496 aaPredicted RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CECR2Q9BXF3 1484 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 UBE4BO95155 1302 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 NAV1Q8NEY1 1877 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 EML6Q6ZMW3 1958 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 RTEL1-TNFRSF6BF6WH68 1400 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ANKRD50Q9ULJ7 1429 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 C5orf60A6NFR6 353 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC22A20A6NK97 555 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF724A8MTY0 619 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 D6RAR5 112 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 C5orf67F2Z3F1 127 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 UBXN8O00124 270 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 MANBAO00462 879 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 PIRO00625 290 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF195O14628 629 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CASC3O15234 703 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 DEFB4AO15263 64 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CLOCKO15516 846 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ATP2C2O75185 946 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ENTPD5O75356 428 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SAP30O75446 220 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CREG1O75629 220 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 BBOX1O75936 387 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 RSL1D1O76021 490 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SRP72O76094 671 aaKnown RBP-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 CLSTN1O94985 981 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 SGPL1O95470 568 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 INSP01308 110 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 ASGR1P07306 291 aa-1.88□□□□□ -2.71
RNU4-88P-201ENST00000411220 H2BFMP0C1H6 154 aa-1.88□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms