RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 TMEM26Q6ZUK4 368 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 ARL6IP6Q8N6S5 226 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 RDH11Q8TC12 318 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 ATP8B4Q8TF62 1192 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 PHYHIPQ92561 330 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 NCLNQ969V3 563 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 C11orf52Q96A22 123 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 MRPL24Q96A35 216 aaKnown RBP3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 SYAP1Q96A49 352 aaPredicted RBP3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 CCSER1Q9C0I3 900 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 CXXC4Q9H2H0 198 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 FAM124BQ9H5Z6 455 aaPredicted RBP3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 ZNF696Q9H7X3 374 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 NMUR1Q9HB89 426 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 TEX10Q9NXF1 929 aaPredicted RBP3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 LHX3Q9UBR4 397 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 SH3BGRL2Q9UJC5 107 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 ZNF490Q9ULM2 529 aaPredicted RBP3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 AP1M2Q9Y6Q5 423 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 RAD54L2Q9Y4B4 1467 aa3.45□□□□□ -1.86
RNU2-28P-201ENST00000410457 LOC105371242A0A075B767 164 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 OR5H15A6NDH6 313 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 MPTX1A8MV57 137 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 MEI4A8MW99 385 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 TRAFD1O14545 582 aaPredicted RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 CPLX1O14810 134 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 ADAM12O43184 909 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 BUB1O43683 1085 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 TSPAN2O60636 221 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 SMPD2O60906 423 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 CSO75390 466 aaKnown RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 ANXA9O76027 345 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 CLDN1O95832 211 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 KRT6BP04259 564 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 FHP07954 510 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 MBL2P11226 248 aaPredicted RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 ZNF26P17031 533 aaPredicted RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 PRKACGP22612 351 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 FCGR2BP31994 310 aaPredicted RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 FCGR2CP31995 323 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 RPL9P32969 192 aaKnown RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 KIF5BP33176 963 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 MDH1P40925 334 aaKnown RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 KRT6CP48668 564 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 TKTL1P51854 596 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 NDST1P52848 882 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 NDST2P52849 883 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 RPL27P61353 136 aaKnown RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 RBBP4Q09028 425 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 FUT7Q11130 342 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 KLF5Q13887 457 aaPredicted RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 P2RY14Q15391 338 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 HAGHQ16775 308 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 UPP1Q16831 310 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 BSPRYQ5W0U4 402 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 ARHGAP11AQ6P4F7 1023 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 ABRAXAS1Q6UWZ7 409 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 ASRGL1Q7L266 308 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 MCM10Q7L590 875 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 KLHDC8BQ8IXV7 354 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 CERS5Q8N5B7 392 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 BCORP1Q8N888 145 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 NUP37Q8NFH4 326 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 ZNF519Q8TB69 540 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 CHPT1Q8WUD6 406 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 TMEM37Q8WXS4 190 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 COG3Q96JB2 828 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 NSMCE3Q96MG7 304 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 WRAP53Q9BUR4 548 aaKnown RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 RBM4Q9BWF3 364 aaKnown RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 DGCR6LQ9BY27 220 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 EGLN1Q9GZT9 426 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 DPH5Q9H2P9 285 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 RWDD1Q9H446 243 aaPredicted RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 ROPN1Q9HAT0 212 aaPredicted RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 B3GAT2Q9NPZ5 323 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 BCAP29Q9UHQ4 241 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 MRPS28Q9Y2Q9 187 aaKnown RBP3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 LRP12Q9Y561 859 aa3.44□□□□□ -1.86
RNU2-28P-201ENST00000410457 NOTCH4Q99466 2003 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 KRTAP29-1A8MX34 341 aaPredicted RBP3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 G3V2L1 256 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 NR5A2O00482 541 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 EDIL3O43854 480 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 IFNB1P01574 187 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 TMOD1P28289 359 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 PDHA2P29803 388 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 PRDX2P32119 198 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 NPY2RP49146 381 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 ZNF177Q13360 481 aaPredicted RBP3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 KIAA0141Q14154 515 aaPredicted RBP3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 MLF2Q15773 248 aaPredicted RBP3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 SHROOM1Q2M3G4 852 aaPredicted RBP3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 RHBDD2Q6NTF9 364 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 NEPROQ6NW34 567 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 TRIM65Q6PJ69 517 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 AFTPHQ6ULP2 937 aa3.43□□□□□ -1.86
RNU2-28P-201ENST00000410457 LCLAT1Q6UWP7 414 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms