RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 LAMP1P11279 417 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 CPMP14384 443 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 COX7A2P14406 83 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 PORP16435 677 aaPredicted RBP14.26□□□□□ -0.13
LSM5-207ENST00000410044 MAOAP21397 527 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 EIF2S3P41091 472 aaKnown RBP14.26□□□□□ -0.13
LSM5-207ENST00000410044 STT3AP46977 705 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 WNT3P56703 355 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 FOXL2P58012 376 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 PHC1P78364 1004 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 STX4Q12846 297 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 MLC1Q15049 377 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 MFSD4BQ5TF39 518 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 BLOC1S3Q6QNY0 202 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 SHISA6Q6ZSJ9 500 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 ANKRD37Q7Z713 158 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 OR4N5Q8IXE1 308 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 ST13P4Q8IZP2 240 aaPredicted RBP14.26□□□□□ -0.13
LSM5-207ENST00000410044 CCDC197Q8NCU1 140 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 NUDT8Q8WV74 236 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 METTL21AQ8WXB1 218 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 TSLPQ969D9 159 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 ZBTB18Q99592 522 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 NMUR2Q9GZQ4 415 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 ACSS1Q9NUB1 689 aaPredicted RBP14.26□□□□□ -0.13
LSM5-207ENST00000410044 C5AR2Q9P296 337 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 HS3ST3B1Q9Y662 390 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 ZNF780BQ9Y6R6 833 aa14.26□□□□□ -0.13
LSM5-207ENST00000410044 DYTNA2CJ06 578 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 FCHO1O14526 889 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 NDUFAB1O14561 156 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 ERAL1O75616 437 aaKnown RBP14.25□□□□□ -0.13
LSM5-207ENST00000410044 ATP1B1P05026 303 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 IFI6P09912 130 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 MPIP34949 423 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 POLR2JP52435 117 aaKnown RBP14.25□□□□□ -0.13
LSM5-207ENST00000410044 NME5P56597 212 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 RPS18P62269 152 aaKnown RBP14.25□□□□□ -0.13
LSM5-207ENST00000410044 KLF10Q13118 480 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 MSANTD1Q6ZTZ1 278 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 MTDHQ86UE4 582 aaKnown RBP14.25□□□□□ -0.13
LSM5-207ENST00000410044 OR9I1Q8NGQ6 314 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 SUN3Q8TAQ9 357 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 EXOSC8Q96B26 276 aaKnown RBP14.25□□□□□ -0.13
LSM5-207ENST00000410044 KLHL29Q96CT2 875 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 RBM18Q96H35 190 aaKnown RBP14.25□□□□□ -0.13
LSM5-207ENST00000410044 IP6K3Q96PC2 410 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 DUSP26Q9BV47 211 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 CCDC106Q9BWC9 280 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 GIMAP4Q9NUV9 329 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 C19orf25Q9UFG5 118 aaPredicted RBP14.25□□□□□ -0.13
LSM5-207ENST00000410044 MRPS18BQ9Y676 258 aaKnown RBP14.25□□□□□ -0.13
LSM5-207ENST00000410044 AKAP13Q12802 2813 aa14.25□□□□□ -0.13
LSM5-207ENST00000410044 A0A1W2PS29 197 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 RNASET2O00584 256 aaKnown RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 SOCS6O14544 535 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 EFSO43281 561 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 DCTN3O75935 186 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 PGRP06401 933 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 S100A3P33764 101 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 FEN1P39748 380 aaKnown RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 KIR3DL1P43629 444 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 ID2Q02363 134 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 DUSP2Q05923 314 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 LRRC74AQ0VAA2 488 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 MAP4K2Q12851 820 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 RCAN2Q14206 197 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 TERF2Q15554 542 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 ZNF750Q32MQ0 723 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 FAM174BQ3ZCQ3 159 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 AGKQ53H12 422 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 SPANXN4Q5MJ08 99 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 ANXA8L1Q5VT79 327 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 FAM69BQ5VUD6 431 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 FAM91A1Q658Y4 838 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 ANKRD26P1Q6NSI1 321 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 KIRREL2Q6UWL6 708 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 UNQ6494/PRO21346Q6UXR6 183 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 CPEB2Q7Z5Q1 589 aaKnown RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 PPP1R32Q7Z5V6 425 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 RAB43Q86YS6 212 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 LRRC25Q8N386 305 aaPredicted RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 PSMA8Q8TAA3 256 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 CTHRC1Q96CG8 243 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 ZBED6CLQ96FA7 236 aaPredicted RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 VPS50Q96JG6 964 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 CCNL2Q96S94 520 aaPredicted RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 WDR77Q9BQA1 342 aaPredicted RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 ZNF700Q9H0M5 742 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 GLIPR2Q9H4G4 154 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 ADAP2Q9NPF8 381 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 FAM120CQ9NX05 1096 aaKnown RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 CCDC167Q9P0B6 97 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 PPIEQ9UNP9 301 aaKnown RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 ENTPD4Q9Y227 616 aa14.24□□□□□ -0.13
LSM5-207ENST00000410044 NUP214P35658 2090 aaPredicted RBP14.24□□□□□ -0.13
LSM5-207ENST00000410044 PRSS51A0A1B0GVH4 220 aa14.23□□□□□ -0.13
LSM5-207ENST00000410044 A0A1W2PRB8 838 aa14.23□□□□□ -0.13
LSM5-207ENST00000410044 TMEM8BA6NDV4 472 aa14.23□□□□□ -0.13
LSM5-207ENST00000410044 C1QTNF9BB2RNN3 333 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms