RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CARD6Q9BX69 1037 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 DHX35Q9H5Z1 703 aaKnown RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 LRRC19Q9H756 370 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 GKN1Q9NS71 199 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 FAM118AQ9NWS6 357 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 COX16Q9P0S2 106 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 OR12D3Q9UGF7 316 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 GAB2Q9UQC2 676 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 MFHAS1Q9Y4C4 1052 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SNX10Q9Y5X0 201 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 CPQQ9Y646 472 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 ANKRD36A6QL64 1941 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 TICRRQ7Z2Z1 1910 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 GOLGA6L7A0A1B0GV03 622 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 CTAGE15A4D2H0 777 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 E9PAM4 449 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 PTGES3LE9PB15 166 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 PLPP2O43688 288 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 MFSD11O43934 449 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 ACSL4O60488 711 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 CST8O60676 142 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 MITFO75030 526 aaPredicted RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 TPPPO94811 219 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 SLU7O95391 586 aaKnown RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 PRAMEF12O95522 483 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 MOCS2O96007 188 aaPredicted RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 HMBSP08397 361 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 ERCC2P18074 760 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 CDKN1AP38936 164 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 FNTAP49354 379 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 SGSHP51688 502 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 TPI1P60174 286 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 ERVK11-1P61568 191 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 OTUD4Q01804 1114 aaKnown RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 IRF3Q14653 427 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 PAFAH1B3Q15102 231 aaKnown RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 ZDHHC20Q5W0Z9 365 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 TMEM198Q66K66 360 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 TTC27Q6P3X3 843 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 CTAGE6Q86UF2 777 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 CCDC50Q8IVM0 306 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 BBS7Q8IWZ6 715 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 NPWQ8N729 165 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 RTL3Q8N8U3 475 aaKnown RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 NOA1Q8NC60 698 aaKnown RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 MNS1Q8NEH6 495 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 GSDMBQ8TAX9 411 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 ACTL9Q8TC94 416 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 MAIP1Q8WWC4 291 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 SMPDL3BQ92485 455 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 TAF15Q92804 592 aaKnown RBP eCLIP3.98□□□□□ -1.77
CLK1-203ENST00000409769 FGF13Q92913 245 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 SLCO2A1Q92959 643 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 TBC1D31Q96DN5 1066 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 PRICKLE1Q96MT3 831 aaPredicted RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 C17orf77Q96MU5 243 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 GUCD1Q96NT3 240 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 OLFM3Q96PB7 478 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 GCNAQ96QF7 691 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 NAP1L3Q99457 506 aaPredicted RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 AP1M1Q9BXS5 423 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 CALN1Q9BXU9 219 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 FRMD8P1Q9BZ68 369 aaPredicted RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 DDX47Q9H0S4 455 aaKnown RBP3.98□□□□□ -1.77
CLK1-203ENST00000409769 TRPV4Q9HBA0 871 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 TRPC7Q9HCX4 862 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 ETNK2Q9NVF9 386 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 TAAR2Q9P1P5 351 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 PCYOX1Q9UHG3 505 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 VANGL2Q9ULK5 521 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 CCL26Q9Y258 94 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 F5P12259 2224 aa3.98□□□□□ -1.77
CLK1-203ENST00000409769 REV3LO60673 3130 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 MUC22E2RYF6 1773 aaPredicted RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 F5H5T6 163 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 H3BQ06 376 aaPredicted RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 TMEM178BH3BS89 294 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 J3QR06 171 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 RAD51CO43502 376 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 LDLRP01130 860 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 PENKP01210 267 aaPredicted RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 NR1D1P20393 614 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 FCARP24071 287 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 CHRNA3P32297 505 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 COILP38432 576 aaPredicted RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 DCTP40126 519 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 CETN2P41208 172 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 NDST2P52849 883 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 DRG2P55039 364 aaKnown RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 VCPP55072 806 aaKnown RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 CDH4P55283 916 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 DYNLT1P63172 113 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 GBE1Q04446 702 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 ZNF33AQ06730 810 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 PPIDQ08752 370 aaKnown RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 FCHO2Q0JRZ9 810 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 XRCC4Q13426 336 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 TFDP2Q14188 446 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms