RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 HK2P52789 917 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 NAA20P61599 178 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 FOLH1Q04609 750 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 SPRED3Q2MJR0 410 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 PIGGQ5H8A4 983 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 IL20RBQ6UXL0 311 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 MDGA2Q7Z553 956 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 SLC22A8Q8TCC7 542 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 ITLN2Q8WWU7 325 aaPredicted RBP13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 RIT1Q92963 219 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 CCDC120Q96HB5 630 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 VKORC1Q9BQB6 163 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 ZNF717Q9BY31 904 aaPredicted RBP13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 ELOVL6Q9H5J4 265 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 NFU1Q9UMS0 254 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 SNX6Q9UNH7 406 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 STK38LQ9Y2H1 464 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 MEMO1Q9Y316 297 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 DIDO1Q9BTC0 2240 aaKnown RBP13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 ARHGAP10A1A4S6 786 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 C3orf80F5H4A9 247 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 ACOT7O00154 380 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 WWP2O00308 870 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 PRKNO60260 465 aaPredicted RBP13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 OR10H2O60403 315 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 SH3BGRLO75368 114 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 ETHE1O95571 254 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 NR2F6P10588 404 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 NEK2P51955 445 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 C3AR1Q16581 482 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 C18orf63Q68DL7 685 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 OR52E8Q6IFG1 317 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 ARHGAP11AQ6P4F7 1023 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 GK5Q6ZS86 529 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 SLC29A4Q7RTT9 530 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 SLC22A16Q86VW1 577 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 SLC22A9Q8IVM8 553 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 TMEM151AQ8N4L1 468 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 OR52B6Q8NGF0 335 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 FAM173AQ9BQD7 235 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 PPCSQ9HAB8 311 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 SACM1LQ9NTJ5 587 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 DCDC2Q9UHG0 476 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 PSME2Q9UL46 239 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 CELSR2Q9HCU4 2923 aa13.47□□□□□ -0.25
NIF3L1-205ENST00000409588 A0A1W2PR48 441 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 CCDC151A5D8V7 595 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 LRRC14BA6NHZ5 514 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 CAPN14A8MX76 684 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 RIPK2O43353 540 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 EEDO75530 441 aaKnown RBP13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 OR6B1O95007 311 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 P04436 131 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 RPS17P08708 135 aaKnown RBP13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 HSD3B1P14060 373 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 HSD3B2P26439 372 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 PIK3R1P27986 724 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 SERPINB3P29508 390 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 PTGS2P35354 604 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 SOX3P41225 446 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 HNRNPH2P55795 449 aaKnown RBP13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 PRSS12P56730 875 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 TRA2BP62995 288 aaKnown RBP13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 HERVK_113P63132 956 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 TRAF3Q13114 568 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 ZNF630Q2M218 657 aaPredicted RBP13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 HYAL4Q2M3T9 481 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 RNFT1Q5M7Z0 435 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 CCNYL2Q5T2Q4 361 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 SLC22A10Q63ZE4 541 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 TMEM211Q6ICI0 200 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 DOLPP1Q86YN1 238 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 HOMEZQ8IX15 550 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 OR4N5Q8IXE1 308 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 METTL4Q8N3J2 472 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 OR4K14Q8NGD5 310 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 ZNF483Q8TF39 744 aaPredicted RBP13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 TP53INP1Q96A56 240 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 SORBS1Q9BX66 1292 aaKnown RBP13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 ERVK-6Q9BXR3 956 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 ZBTB26Q9HCK0 441 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 CNIH4Q9P003 139 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 TRPS1Q9UHF7 1281 aa13.46□□□□□ -0.25
NIF3L1-205ENST00000409588 TEX15Q9BXT5 2789 aa13.46□□□□□ -0.26
NIF3L1-205ENST00000409588 CRYBG3Q68DQ2 2970 aa13.46□□□□□ -0.26
NIF3L1-205ENST00000409588 MYO7BQ6PIF6 2116 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 OR14I1A6ND48 311 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 PRSS44E7EML9 344 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 H3BQF6 201 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 TMPRSS11DO60235 418 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 WISP2O76076 250 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 KRT6AP02538 564 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 KRT6BP04259 564 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 IMPDH1P20839 514 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 COL8A1P27658 744 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 HSD17B3P37058 310 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 KRT6CP48668 564 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms