RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 NR1D1P20393 614 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 PIK3R1P27986 724 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 HEPACAMQ14CZ8 416 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 GALNTL6Q49A17 601 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 ATP6AP1LQ52LC2 224 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 RFTN2Q52LD8 501 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-202ENST00000409326 AGAP7PQ5VUJ5 663 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 ST13P4Q8IZP2 240 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-202ENST00000409326 OR4K14Q8NGD5 310 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 OR14A16Q8NHC5 309 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.96■□□□□ 0.63
PTCD3-202ENST00000409326 ELP5Q8TE02 316 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 PTPMT1Q8WUK0 201 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-202ENST00000409326 ZNF75CPQ92670 426 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-202ENST00000409326 DAZLQ92904 295 aaKnown RBP18.96■□□□□ 0.63
PTCD3-202ENST00000409326 AGAP4Q96P64 663 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 MYNNQ9NPC7 610 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 ZNF71Q9NQZ8 489 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-202ENST00000409326 INTS9Q9NV88 658 aaKnown RBP18.96■□□□□ 0.63
PTCD3-202ENST00000409326 PNPOQ9NVS9 261 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 C5AR2Q9P296 337 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 WBP11Q9Y2W2 641 aaKnown RBP18.96■□□□□ 0.63
PTCD3-202ENST00000409326 CLCA3PQ9Y6N3 262 aa18.96■□□□□ 0.63
PTCD3-202ENST00000409326 ATP6AP2A0A1C7CYW4 349 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 C17orf105B2RV13 164 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 ATP6AP2O75787 350 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 SOX11P35716 441 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 ALDH9A1P49189 494 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 CRB2Q5IJ48 1285 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 IKBIPQ70UQ0 350 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 HPS6Q86YV9 775 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 APCDD1LQ8NCL9 501 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 DYDC1Q8WWB3 177 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 RBM18Q96H35 190 aaKnown RBP18.95■□□□□ 0.62
PTCD3-202ENST00000409326 KCNK13Q9HB14 408 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 PSME2Q9UL46 239 aa18.95■□□□□ 0.62
PTCD3-202ENST00000409326 SPTA1P02549 2419 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 PEX11AO75192 247 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 SLC35E2P0CK97 266 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 SDC1P18827 310 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 TNNI3P19429 210 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 GALNSP34059 522 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 GPR143P51810 404 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 HK2P52789 917 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 FAM71E1Q6IPT2 247 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 H3F3CQ6NXT2 135 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 ASB18Q6ZVZ8 466 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 SIRT6Q8N6T7 355 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 MORN4Q8NDC4 146 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 CDC26Q8NHZ8 85 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 LRRC8CQ8TDW0 803 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 KLHL29Q96CT2 875 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 TUBGCP3Q96CW5 907 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 VMP1Q96GC9 406 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 EHD3Q9NZN3 535 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 PTGFRNQ9P2B2 879 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 GIMAP2Q9UG22 337 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 UTS2RQ9UKP6 389 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 KALRNO60229 2985 aa18.94■□□□□ 0.62
PTCD3-202ENST00000409326 A0A1W2PS29 197 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 OR10H2O60403 315 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 CPMP14384 443 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 DDCP20711 480 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 TACR1P25103 407 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 MAPK1P28482 360 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 CLCN2P51788 898 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 XKP51811 444 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 C2orf80Q0P641 193 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 SPRED3Q2MJR0 410 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 HSP90B2PQ58FF3 399 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 C6orf136Q5SQH8 315 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 IGFL2Q6UWQ7 119 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 ISLR2Q6UXK2 745 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 KIF2BQ8N4N8 673 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 SLC2A12Q8TD20 617 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 NCLNQ969V3 563 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 PPWD1Q96BP3 646 aaKnown RBP18.93■□□□□ 0.62
PTCD3-202ENST00000409326 NUF2Q9BZD4 464 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 MED4Q9NPJ6 270 aa18.93■□□□□ 0.62
PTCD3-202ENST00000409326 DYRK3O43781 588 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 ERAL1O75616 437 aaKnown RBP18.92■□□□□ 0.62
PTCD3-202ENST00000409326 DDAH2O95865 285 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 PORP16435 677 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-202ENST00000409326 MFAP5Q13361 173 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 B3GNTL1Q67FW5 361 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-202ENST00000409326 IGFL3Q6UXB1 125 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 DGAT2L6Q6ZPD8 337 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 FNDC5Q8NAU1 212 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 OR1N1Q8NGS0 311 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 TM9SF4Q92544 642 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 CNRIP1Q96F85 164 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-202ENST00000409326 EGLN2Q96KS0 407 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 PPP1R36Q96LQ0 422 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 C7orf26Q96N11 449 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 ZNF681Q96N22 645 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 LMF1Q96S06 567 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 OR8D2Q9GZM6 311 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 EPS8L2Q9H6S3 715 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 MEAF6Q9HAF1 191 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 ZBTB20Q9HC78 741 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms