RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 LHX3Q9UBR4 397 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 UNC13AQ9UPW8 1703 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 TMEM110-MUSTN1A8MSY1 372 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 SLC1A7O00341 560 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 PDXKO00764 312 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 LRCH4O75427 683 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 IDH1O75874 414 aaKnown RBP4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 BBOX1O75936 387 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 ERVK-10P10266 1014 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 THRBP10828 461 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 GP9P14770 177 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 EZRP15311 586 aaKnown RBP4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 ANOS1P23352 680 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 FCGR2BP31994 310 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 ADRA1AP35348 466 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 FEN1P39748 380 aaKnown RBP4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 SOX3P41225 446 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 BACE1P56817 501 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 BTG1P62324 171 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 TMEM41BQ5BJD5 291 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 LIPKQ5VXJ0 399 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 SULT1C3Q6IMI6 304 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 C19orf48Q6RUI8 117 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 CCBE1Q6UXH8 406 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 Q6ZVQ6 151 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 ITIH5Q86UX2 942 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 TRIM58Q8NG06 486 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 OR10G8Q8NGN5 311 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 GOLGA5Q8TBA6 731 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 GIMAP1Q8WWP7 306 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 MCHR2Q969V1 340 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 C2orf48Q96LS8 159 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 FAM218AQ96MZ4 157 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 NACA2Q9H009 215 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 RAB33BQ9H082 229 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 UTP6Q9NYH9 597 aaKnown RBP4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF624Q9P2J8 865 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 SELENOKQ9Y6D0 94 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 IKBKGQ9Y6K9 419 aa4.26□□□□□ -1.73
HMGB1P13-201ENST00000406019 CLRN2A0PK11 232 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 FAM172BPA6NC97 362 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 RNF222A6NCQ9 220 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 GLTPD2A6NH11 291 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 SHISA7A6NL88 538 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 GPR89AB7ZAQ6 455 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 ANHXE9PGG2 379 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 H0YCG3 227 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 MCF2LO15068 1137 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 CTAGE5O15320 804 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 TLX2O43763 284 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 AP2A2O94973 939 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 ATP1A1P05023 1023 aaKnown RBP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 PCCBP05166 539 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 GPR89BP0CG08 455 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 CFC1BP0CG36 223 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 CFC1P0CG37 223 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 CALCBP10092 127 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 RRASP10301 218 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 PRG2P13727 222 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 MYOGP15173 224 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 HOXD10P28358 340 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 ACADSBP45954 432 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 FHITP49789 147 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 RFTN1Q14699 578 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 EFTUD2Q15029 972 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 TAB1Q15750 504 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 SHROOM1Q2M3G4 852 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 ANKRD55Q3KP44 614 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 CEP55Q53EZ4 464 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 ARHGAP17Q68EM7 881 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 RTL6Q6ICC9 239 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 CES3Q6UWW8 571 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 RGS9BPQ6ZS82 235 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 GRAMD2AQ8IUY3 354 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 UNC5CLQ8IV45 518 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 SLC22A15Q8IZD6 547 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 PARP8Q8N3A8 854 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 NIPA2Q8N8Q9 360 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 OR5AP2Q8NGF4 316 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 OR52M1Q8NGK5 317 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 OR10T2Q8NGX3 314 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF274Q96GC6 653 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 PCED1BQ96HM7 432 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 AGAP3Q96P47 875 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 UHRF2Q96PU4 802 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 RAB40CQ96S21 281 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 IWS1Q96ST2 819 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 NDUFAF3Q9BU61 184 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 WRAP53Q9BUR4 548 aaKnown RBP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 PAPOLGQ9BWT3 736 aaKnown RBP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 CXXC4Q9H2H0 198 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 FAM124BQ9H5Z6 455 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 PALMDQ9NP74 551 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF71Q9NQZ8 489 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 ERVK-18Q9QC07 812 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 MIOXQ9UGB7 285 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 FOXJ3Q9UPW0 622 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 KLHDC2Q9Y2U9 406 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 RRP15Q9Y3B9 282 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms