RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 RGS6P49758 472 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 TAS2R39P59534 338 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 FADDQ13158 208 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 GPR50Q13585 617 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 PEA15Q15121 130 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 DUSP28Q4G0W2 176 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 IQCCQ4KMZ1 466 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 TCEAL6Q6IPX3 200 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 ZDHHC17Q8IUH5 632 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SLC22A9Q8IVM8 553 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SVOPLQ8N434 492 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 FBXO39Q8N4B4 442 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 OR5T2Q8NGG2 359 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 ZDHHC1Q8WTX9 485 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 RNF139Q8WU17 664 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 CXorf58Q96LI9 332 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 KCTD7Q96MP8 289 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SLC38A3Q99624 504 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 VPS25Q9BRG1 176 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 RAD18Q9NS91 495 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 DNAJC27Q9NZQ0 273 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 YBX2Q9Y2T7 364 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 LOC102724200A0A096LPH7 203 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 A0A1W2PP18 115 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 M0QYT0 321 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 SNRNP70P08621 437 aaKnown RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 HOXD4P09016 255 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 SPP1P10451 314 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 MAGEB1P43366 347 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 NDUFV1P49821 464 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 CDH12P55289 794 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 CREMQ03060 361 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 KCNC4Q03721 635 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 GALNT2Q10471 571 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 SKP2Q13309 424 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 PON3Q15166 354 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 STEAP4Q687X5 459 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 TRIM40Q6P9F5 258 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 OR7G2Q8NG99 324 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 PPTC7Q8NI37 304 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 C14orf79Q96F83 325 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 FAM193BQ96PV7 902 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 MRPL57Q9BQC6 102 aaKnown RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 OR2S2Q9NQN1 319 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 RCOR3Q9P2K3 495 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 CFAP20Q9Y6A4 193 aaKnown RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 GXYLT2A0PJZ3 443 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 ZNF487B1APH4 448 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 PHOX2AO14813 284 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 HSPA12AO43301 675 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 GATCO43716 136 aaKnown RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 OR10H2O60403 315 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 FMO6PO60774 539 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 SERPIND1P05546 499 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 ZNF25P17030 456 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 JUNBP17275 347 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 CTPS1P17812 591 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 CD86P42081 329 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 RPL34P49207 117 aaKnown RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 CCR6P51684 374 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 SOX4Q06945 474 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 KLHL22Q53GT1 634 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 AKR1C8PQ5T2L2 129 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 GLT8D1Q68CQ7 371 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 PDE12Q6L8Q7 609 aaKnown RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 KDELC1Q6UW63 502 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 ZNF730Q6ZMV8 503 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 RETREG3Q86VR2 466 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 NLGN4YQ8NFZ3 816 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 TMEM40Q8WWA1 233 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 NSMAFQ92636 917 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 YIPF5Q969M3 257 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 SAMD11Q96NU1 681 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 OR2A14Q96R47 310 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 OR52E6Q96RD3 313 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 TCEAL7Q9BRU2 100 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 TMEM175Q9BSA9 504 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 C8orf33Q9H7E9 229 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 PPP4R1LQ9P1A2 415 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 LIPT1Q9Y234 373 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 CACNA1HO95180 2353 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 EP300Q09472 2414 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 GLYATL1P3A0A0U1RQE8 302 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 OR5K3A6NET4 321 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 GRXCR2A6NFK2 248 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 UGT2B17O75795 530 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 ZNF432O94892 652 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 HMBSP08397 361 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 GIFP27352 417 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 FAM189BP81408 668 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 NDUFAF6Q330K2 333 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 GPR158Q5T848 1215 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 C9orf57Q5W0N0 161 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 C18orf63Q68DL7 685 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 PTCRAQ6ISU1 281 aaPredicted RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 FAM171BQ6P995 826 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 ALKAL1Q6UXT8 129 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 DCP1BQ8IZD4 617 aaKnown RBP8.06□□□□□ -1.12
NDE1-202ENST00000396355 TMIEQ8NEW7 156 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 WNT2BQ93097 391 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms