RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TPD52P55327 224 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 OR4D2P58180 307 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 BNC1Q01954 994 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 EIF2B5Q13144 721 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 TNK1Q13470 666 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZMYND11Q15326 602 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 AAK1Q2M2I8 961 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 TBRG1Q3YBR2 411 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 IQCCQ4KMZ1 466 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PAGE3Q5JUK9 113 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF648Q5T619 568 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 NDUFAF5Q5TEU4 345 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 GLYATQ6IB77 296 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 CAPN13Q6MZZ7 669 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF517Q6ZMY9 492 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 Q6ZVL8 140 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 THOC6Q86W42 341 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 OR4M1Q8NGD0 313 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 DNAJB14Q8TBM8 379 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SLC38A4Q969I6 547 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PYCR2Q96C36 320 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SMIM10Q96HG1 83 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 NSMCE2Q96MF7 247 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF285Q96NJ3 590 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 KCNK17Q96T54 332 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ABCG4Q9H172 646 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 DDX31Q9H8H2 851 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 CARS2Q9HA77 564 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 THUMPD1Q9NXG2 353 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 TEKT2Q9UIF3 430 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 C3orf18Q9UK00 162 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 TPRKBQ9Y3C4 175 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PCDHGB2Q9Y5G2 931 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ATP6V1G2-DDX39BF2Z307 99 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 LOC110117498-PIK3R3F6TDL0 507 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 TFECO14948 347 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 NUPL2O15504 423 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 SOX30O94993 753 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 MED26O95402 600 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SLC4A1P02730 911 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 MT-ND2P03891 347 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 MYOGP15173 224 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ALOX12P18054 663 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SAT1P21673 171 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PSMB9P28065 219 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 STARD6P59095 220 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ABHD18Q0P651 414 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 RAPSNQ13702 412 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 NFYCQ13952 458 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 RFX4Q33E94 735 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 LEXMQ3ZCV2 418 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 FAM98BQ52LJ0 330 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 EOGTQ5NDL2 527 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ANXA8L1Q5VT79 327 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 CACHD1Q5VU97 1274 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ANKRD34AQ69YU3 496 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 MRM1Q6IN84 353 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 FAM71E1Q6IPT2 247 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF425Q6IV72 752 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 AGTRAPQ6RW13 159 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 NXPE4Q6UWF7 544 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 TMEM64Q6YI46 380 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 LRRTM4Q86VH4 590 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 IFNEQ86WN2 208 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SYTL1Q8IYJ3 562 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 DTWD1Q8N5C7 304 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 GIMAP1Q8WWP7 306 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ST8SIA2Q92186 375 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SLC7A6Q92536 515 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PHF21BQ96EK2 531 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ORAI3Q9BRQ5 295 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 TRAF4Q9BUZ4 470 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF304Q9HCX3 659 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 BPIFA1Q9NP55 256 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 CCNB1IP1Q9NPC3 277 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZC4H2Q9NQZ6 224 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ACSS1Q9NUB1 689 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 EIF3KQ9UBQ5 218 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 REV1Q9UBZ9 1251 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 MBD1Q9UIS9 605 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF490Q9ULM2 529 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 MMP17Q9ULZ9 603 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 FNDC3AQ9Y2H6 1198 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 PEX16Q9Y5Y5 336 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PNMA8CA0A1B0GUJ8 204 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 TRBC2A0A5B9 178 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 MEIOCA2RUB1 952 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PPP6CO00743 305 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 MAN2B1O00754 1011 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 BCKDKO14874 412 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SCAMP2O15127 329 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 PDPK1O15530 556 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 TBX6O95947 436 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 CEACAM5P06731 702 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 HIST1H2AGP0C0S8 130 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 BCKDHAP12694 445 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 HOXB3P14651 431 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF8P17098 575 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 ITGB6P18564 788 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 HIST1H2ADP20671 130 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms