RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ANKRD49Q8WVL7 239 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 RIT1Q92963 219 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 ULK4Q96C45 1275 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 CNDP2Q96KP4 475 aaKnown RBP0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 KIR2DL4Q99706 377 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 PRMT1Q99873 361 aaKnown RBP0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 SPAG8Q99932 426 aaPredicted RBP0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 C19orf43Q9BQ61 176 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 LSG1Q9H089 658 aaKnown RBP0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 GPR173Q9NS66 373 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 PLEK2Q9NYT0 353 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 TAS2R16Q9NYV7 291 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 WDR35Q9P2L0 1181 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 SWAP70Q9UH65 585 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 KLK12Q9UKR0 248 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 RAB26Q9ULW5 256 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 MOKQ9UQ07 419 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 ERVK-19Q9WJR5 959 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 SLC9A8Q9Y2E8 581 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 TTLL3Q9Y4R7 772 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 CCL27Q9Y4X3 112 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 LIPGQ9Y5X9 500 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 FLVCR1Q9Y5Y0 555 aa0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 ZFP37Q9Y6Q3 630 aaPredicted RBP0.89□□□□□ -2.27
SNORD28B-201ENST00000390993 ARHGAP23Q9P227 1491 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 IGLV3-16A0A075B6K0 115 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 A0A087WV48 116 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 URADA6NGE7 173 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 A8MXE2 369 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 HMGB1P1B2RPK0 211 aaPredicted RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 SAP18O00422 153 aaKnown RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 EMC8O43402 210 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 LATO43561 262 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 CSO75390 466 aaKnown RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 CSDE1O75534 798 aaKnown RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 CRCPO75575 148 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 GAS8O95995 478 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 GBAP04062 536 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 GIG44P09565 113 aaPredicted RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 P0C879 139 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 SLC35E2P0CK97 266 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 AKR1B1P15121 316 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 CPN1P15169 458 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 IL11P20809 199 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 MDKP21741 143 aaPredicted RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 GABRR1P24046 479 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 STIP1P31948 543 aaKnown RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 XCR1P46094 333 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 NT5C2P49902 561 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 CCR4P51679 360 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 SLC12A3P55017 1021 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 TIMM10P62072 90 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 SCN1BQ07699 218 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 SIM2Q14190 667 aaPredicted RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 C16orf72Q14CZ0 275 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 PSMD6Q15008 389 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 TRADDQ15628 312 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 KCTD19Q17RG1 926 aaPredicted RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 SHROOM1Q2M3G4 852 aaPredicted RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 PAN3Q58A45 887 aaKnown RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 ACER2Q5QJU3 275 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 OTPQ5XKR4 325 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 SLC22A10Q63ZE4 541 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 IRGCQ6NXR0 463 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 CFAP161Q6P656 301 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 IGFL2Q6UWQ7 119 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 SCARA5Q6ZMJ2 495 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 CYP4V2Q6ZWL3 525 aaPredicted RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 MOB1BQ7L9L4 216 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 APCDD1Q8J025 514 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 LINC01555Q8NAE3 123 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 KIAA0895Q8NCT3 520 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 ZNRF1Q8ND25 227 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 CCDC26Q8TAB7 109 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 ADAMTS16Q8TE57 1224 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 AFAP1L1Q8TED9 768 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 FRAT1Q92837 279 aaPredicted RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 MRPL24Q96A35 216 aaKnown RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 VPS33AQ96AX1 596 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 C16orf74Q96GX8 76 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 C9orf85Q96MD7 179 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 ERGIC2Q96RQ1 377 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 RAB40CQ96S21 281 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 RANBP9Q96S59 729 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 TTYH2Q9BSA4 534 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 ATG101Q9BSB4 218 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 TRIM9Q9C026 710 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 NMUR2Q9GZQ4 415 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 ELOVL4Q9GZR5 314 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 ZNF665Q9H7R5 613 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 NANOGQ9H9S0 305 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 TMEM161AQ9NX61 479 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 VPS18Q9P253 973 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 RCOR3Q9P2K3 495 aaPredicted RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 PRODH2Q9UF12 536 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 APOBEC3BQ9UH17 382 aaKnown RBP0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 MLXQ9UH92 298 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 PDE10AQ9Y233 779 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 ASTN1O14525 1302 aa0.88□□□□□ -2.27
SNORD28B-201ENST00000390993 ACEP12821 1306 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms