RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 ZSCAN12O43309 604 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SYT7O43581 403 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SNX3O60493 162 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 BCAS1O75363 584 aaPredicted RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 RPS6KA5O75582 802 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 FLOT1O75955 427 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 CLPXO76031 633 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 ZNF432O94892 652 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 PAK4O96013 591 aaPredicted RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 GAPDHP04406 335 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 CLTAP09496 248 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 HOXC6P09630 235 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 CT62P0C5K7 136 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 ERVK-10P10266 1014 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 IRF2P14316 349 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MYL6BP14649 208 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MYOD1P15172 320 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 EZRP15311 586 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 TSPAN8P19075 237 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 DPP4P27487 766 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SSTR2P30874 369 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MAT2AP31153 395 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 HNRNPH3P31942 346 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 CHI3L1P36222 383 aaPredicted RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SLC6A8P48029 635 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 LEPRP48357 1165 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 ENTPD1P49961 510 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 PPT1P50897 306 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 NR0B1P51843 470 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 LIMK2P53671 638 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 CRYBB1P53674 252 aaPredicted RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 HSPA2P54652 639 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MAZP56270 477 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 RPS8P62241 208 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 RPL36AP83881 106 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 BNC1Q01954 994 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 OC90Q02509 493 aaPredicted RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MAP2K1Q02750 393 aaPredicted RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MYBPHQ13203 477 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 EXOSC2Q13868 293 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 EXOSC7Q15024 291 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 EXT1Q16394 746 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 CLPPQ16740 277 aaPredicted RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 KIF19Q2TAC6 998 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 GPAT3Q53EU6 434 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 FBXO48Q5FWF7 155 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 FBXL22Q6P050 247 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 KLC3Q6P597 504 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 CD164L2Q6UWJ8 174 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 CEACAM20Q6UY09 585 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SLC16A12Q6ZSM3 486 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 TRMT11Q7Z4G4 463 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SMIM29Q86T20 159 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SLC22A16Q86VW1 577 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 AMIGO1Q86WK6 493 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 FAM131BQ86XD5 332 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 ECHDC2Q86YB7 292 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MAP7D3Q8IWC1 876 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 ARFGAP2Q8N6H7 521 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 FAM86B1Q8N7N1 296 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 POC1AQ8NBT0 407 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 C7orf57Q8NEG2 295 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 NFAM1Q8NET5 270 aaPredicted RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SDR9C7Q8NEX9 313 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 BPIFCQ8NFQ6 507 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 OR9K2Q8NGE7 335 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 NANPQ8TBE9 248 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 GRHL3Q8TE85 626 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 ST8SIA1Q92185 356 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 FAM3CQ92520 227 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 ABTB1Q969K4 478 aaPredicted RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 TM4SF19Q96DZ7 209 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 PELI1Q96FA3 418 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 COQ2Q96H96 371 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 TMEM19Q96HH6 336 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SENP8Q96LD8 212 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 C12orf66Q96MD2 445 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 ANKRD27Q96NW4 1050 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MTMR9Q96QG7 549 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SIKE1Q9BRV8 207 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SF3B5Q9BWJ5 86 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 RBM24Q9BX46 236 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 NLNQ9BYT8 704 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 FAM192AQ9GZU8 254 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 RBM38Q9H0Z9 239 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 OR2AG1Q9H205 316 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 FBXO44Q9H4M3 255 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 EXO5Q9H790 373 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 C10orf88Q9H8K7 445 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 RNF146Q9NTX7 359 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 SMOXQ9NWM0 555 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 AHSPQ9NZD4 102 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 PKD2L2Q9NZM6 624 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 WNT16Q9UBV4 365 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MIOXQ9UGB7 285 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 LCMT1Q9UIC8 334 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 PLCL2Q9UPR0 1127 aa1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MRPS7Q9Y2R9 242 aaKnown RBP1.93□□□□□ -2.1
SNORA40.19-201ENST00000390846 MEMO1Q9Y316 297 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms