RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 CLDN16Q9Y5I7 305 aa16.19■□□□□ 0.18
HLA-DMA-201ENST00000374843 PCNX2A6NKB5 2137 aa16.19■□□□□ 0.18
HLA-DMA-201ENST00000374843 SPTBP11277 2137 aa16.19■□□□□ 0.18
HLA-DMA-201ENST00000374843 DMXL1Q9Y485 3027 aa16.19■□□□□ 0.18
HLA-DMA-201ENST00000374843 FER1L5A0AVI2 2057 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 SPEGQ15772 3267 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 FAM186AA6NE01 2351 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 A0A1W2PNU3 283 aaPredicted RBP16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 PLD2O14939 933 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 CTNSO60931 367 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 ERAL1O75616 437 aaKnown RBP16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 SLITRK5O94991 958 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 ATP1B1P05026 303 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 CPMP14384 443 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 NQO1P15559 274 aaKnown RBP16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 PGM1P36871 562 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 NCBP2P52298 156 aaKnown RBP eCLIP16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 SLC7A2P52569 658 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 PLIN5Q00G26 463 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 FOLH1Q04609 750 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 ABHD18Q0P651 414 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 NKAIN1Q4KMZ8 207 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 PIGGQ5H8A4 983 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 DCAF12Q5T6F0 453 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 NANOGP8Q6NSW7 305 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 TMEM64Q6YI46 380 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 QSOX2Q6ZRP7 698 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 TMPRSS12Q86WS5 348 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 SLC15A3Q8IY34 581 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 ULK2Q8IYT8 1036 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 TRIML2Q8N7C3 387 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 COL26A1Q96A83 441 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 MCUR1Q96AQ8 359 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 RAB3IPQ96QF0 476 aaPredicted RBP16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 TAAR9Q96RI9 348 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 RBCK1Q9BYM8 510 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 B3GNT4Q9C0J1 378 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 SLC7A5P2Q9GIP4 190 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 CXorf36Q9H7Y0 433 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 NANOGQ9H9S0 305 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 CMTM6Q9NX76 183 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 TRPC4Q9UBN4 977 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 PCDHGB4Q9UN71 923 aa16.18■□□□□ 0.18
HLA-DMA-201ENST00000374843 IGKV3D-11A0A0A0MRZ8 115 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 A0A1W2PS29 197 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 SYNDIG1LA6NDD5 238 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 AGRPO00253 132 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 NME4O00746 187 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 CLDN4O14493 209 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 DNAJA2O60884 412 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 BMP10O95393 424 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 CPSF4O95639 269 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 NTRK1P04629 796 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 ZNF28P17035 718 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 ITIH1P19827 911 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 PPIBP23284 216 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 MPIP34949 423 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 CDK9P50750 372 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 NOVA1P51513 510 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 XKP51811 444 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 MANFP55145 182 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 DCDP81605 110 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 SAMD4BQ5PRF9 694 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 FAM180BQ6P0A1 224 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 ZNF551Q7Z340 670 aaPredicted RBP16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 C7orf57Q8NEG2 295 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 WDR36Q8NI36 951 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 SFXN5Q8TD22 340 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 ZFP90Q8TF47 636 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 CLIP3Q96DZ5 547 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 SH3GL1Q99961 368 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 THTPAQ9BU02 230 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 ASPSCR1Q9BZE9 553 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 SLC26A1Q9H2B4 701 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 EPS8L2Q9H6S3 715 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 PRTFDC1Q9NRG1 225 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 C14orf105Q9NVL8 296 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 CTSFQ9UBX1 484 aa16.17■□□□□ 0.18
HLA-DMA-201ENST00000374843 PMS2P1A4D2B8 440 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 TGFBR3LH3BV60 316 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 MEN1O00255 615 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 LDB3O75112 727 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 ANP32DO95626 131 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 GSNP06396 782 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 CYC1P08574 325 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 JMJD7P0C870 316 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 SLC35E2P0CK97 266 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 PORP16435 677 aaPredicted RBP16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 UQCRC2P22695 453 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 FEN1P39748 380 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 EEFSECP57772 596 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 DMTNQ08495 405 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 HSPB3Q12988 150 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 BIKQ13323 160 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 SELPLGQ14242 412 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 ZNF750Q32MQ0 723 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 RABL3Q5HYI8 236 aa16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 ZNF517Q6ZMY9 492 aaPredicted RBP16.16■□□□□ 0.18
HLA-DMA-201ENST00000374843 ZNF621Q6ZSS3 439 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms