RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 ANKRD33BA6NCL7 494 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 LRRC3CA6NJW4 275 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 RTCAO00442 366 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 DVL2O14641 736 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 C1QAP02745 245 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 FBXO45P0C2W1 286 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 CD1DP15813 335 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 EPORP19235 508 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 SERPINB3P29508 390 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 TIMP3P35625 211 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 MSH2P43246 934 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 ASCL1P50553 236 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 DGKQP52824 942 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 SLC12A2P55011 1212 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 ATP6V0D1P61421 351 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 ADAM8P78325 824 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 IRF8Q02556 426 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 PCDH1Q08174 1060 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 CBLBQ13191 982 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 FLYWCH1Q4VC44 716 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 PRAMEF20Q5VT98 475 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 DGAT2L6Q6ZPD8 337 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 LAS2Q8IYD9 372 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 MMP21Q8N119 569 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 RELL2Q8NC24 303 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 TANKQ92844 425 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 PPWD1Q96BP3 646 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 FBXL20Q96IG2 436 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 KRT12Q99456 494 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 GSX1Q9H4S2 264 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 RPF2Q9H7B2 306 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 CBLCQ9ULV8 474 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 VPS13CQ709C8 3753 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 E7ESA3 106 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 HRKO00198 91 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 TP73O15350 636 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 TGFB1P01137 390 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 CCDC166P0CW27 439 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 BMP5P22003 454 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 SERPINB1P30740 379 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 PDIA2Q13087 525 aaKnown RBP12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 SLAMF1Q13291 335 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 OR4D1Q15615 310 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 DEPDC1Q5TB30 811 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 KHDRBS2Q5VWX1 349 aaKnown RBP12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 OR4C11Q6IEV9 310 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 POMZP3Q6PJE2 187 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 MAATS1Q7Z4T9 603 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 SLC35F6Q8N357 371 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 LIX1Q8N485 282 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 PDPRQ8NCN5 879 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 NAXEQ8NCW5 288 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 FBXO36Q8NEA4 188 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 TNIP2Q8NFZ5 429 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 OR10G3Q8NGC4 313 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 TSPAN17Q96FV3 270 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 CMTM7Q96FZ5 175 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 UBXN10Q96LJ8 280 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 TIMP4Q99727 224 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 CD244Q9BZW8 370 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 SLC6A15Q9H2J7 730 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 SMYD2Q9NRG4 433 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 CD274Q9NZQ7 290 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 MTRF1LQ9UGC7 380 aaKnown RBP12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 ADGRE2Q9UHX3 823 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 CNOT11Q9UKZ1 510 aaKnown RBP12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 IKBKGQ9Y6K9 419 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 JMJD1CQ15652 2540 aa12.02□□□□□ -0.49
TRAPPC3-201ENST00000373159 NINQ8N4C6 2090 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 IQANK1A0A1B0GTG1 560 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 CCNT2O60583 730 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 TRIM3O75382 744 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 SEC31AO94979 1220 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 EPXP11678 715 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 ALOX15P16050 662 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 TLX1P31314 330 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 SSR2P43308 183 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 TRPC1P48995 793 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 PLIN5Q00G26 463 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 CRYZQ08257 329 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 DUSP8Q13202 625 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 FASTKD3Q14CZ7 662 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 SF3B4Q15427 424 aaKnown RBP eCLIP12.01□□□□□ -0.495e-7■■■□□ 16.5
TRAPPC3-201ENST00000373159 NTRK2Q16620 822 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 ACSF3Q4G176 576 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 TBCELQ5QJ74 424 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 TMEM198Q66K66 360 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 MED27Q6P2C8 311 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 SLC29A4Q7RTT9 530 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 LRRC70Q7Z2Q7 622 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 GPR180Q86V85 440 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 LACC1Q8IV20 430 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 ST13P4Q8IZP2 240 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 FAM13CQ8NE31 585 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 OR7G3Q8NG95 312 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 RGMAQ96B86 450 aa12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 JSRP1Q96MG2 331 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 PELOQ9BRX2 385 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-201ENST00000373159 DOHHQ9BU89 302 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms