RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 NSUN5Q96P11 429 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 DGAT2Q96PD7 388 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CDK15Q96Q40 435 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 VKORC1Q9BQB6 163 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CENPKQ9BS16 269 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZDHHC11Q9H8X9 412 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 LYARQ9NX58 379 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 XPR1Q9UBH6 696 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ERVK-11Q9UQG0 969 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OTOGQ6ZRI0 2925 aa12.65□□□□□ -0.38
TNFRSF1A-202ENST00000366159 A0A0G2JMM0 328 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 A0A1W2PPB8 328 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 A0A1W2PRS3 328 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 KIR3DP1A8MWS1 328 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TRIM49D1C9J1S8 452 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TFECO14948 347 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SEMA3DO95025 777 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CLPSP04118 112 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 RPS17P08708 135 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ESRRAP11474 423 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 COX7A2P14406 83 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ALOX15P16050 662 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ABOP16442 354 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CNR1P21554 472 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 HTR1EP28566 365 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TLX1P31314 330 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PTGS2P35354 604 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 BUD31P41223 144 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PHEXP78562 749 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 FOXO1Q12778 655 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 HYAL4Q2M3T9 481 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ZNF791Q3KP31 576 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 C10orf62Q5T681 223 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ADGRD1Q6QNK2 874 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 OPN5Q6U736 354 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TIFABQ6ZNK6 161 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 RTL4Q6ZR62 310 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ZNF483Q8TF39 744 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 FBXL20Q96IG2 436 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SGCZQ96LD1 299 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 MRPL57Q9BQC6 102 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CHST11Q9NPF2 352 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 COPS7AQ9UBW8 275 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ZNF225Q9UK10 706 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 EML6Q6ZMW3 1958 aa12.64□□□□□ -0.39
TNFRSF1A-202ENST00000366159 A0A087WUV0 522 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ARHGAP10A1A4S6 786 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 POC1B-GALNT4F8VUJ3 575 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PPP6CO00743 305 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PRRG2O14669 202 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PGRMC2O15173 223 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 AIFM1O95831 613 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ABHD2P08910 425 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CCNG1P51959 295 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SMSP52788 366 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SLC37A1P57057 533 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PLIN5Q00G26 463 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 EMC4Q5J8M3 183 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 FRG2Q64ET8 278 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 RGS9BPQ6ZS82 235 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 NUDT13Q86X67 352 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 MARVELD2Q8N4S9 558 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SLC15A4Q8N697 577 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ACBD4Q8NC06 268 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 UHMK1Q8TAS1 419 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SREK1Q8WXA9 508 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 MTFMTQ96DP5 389 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 FRG2BQ96QU4 278 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SERPINI1Q99574 410 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 FAM173AQ9BQD7 235 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TTTY12Q9BZ98 90 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TXLNGYQ9BZA5 131 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 MRPL46Q9H2W6 279 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ADAM29Q9UKF5 820 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 IKBKGQ9Y6K9 419 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 AKAP9Q99996 3911 aa12.63□□□□□ -0.39
TNFRSF1A-202ENST00000366159 A0A1B0GVC2 190 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 A0A1W2PS29 197 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 GLOD5A6NK44 160 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 A8MT66 165 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SMIM24O75264 130 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CLDN14O95500 239 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 IGHG3P01860 377 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 GBAP04062 536 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SNRPAP09012 282 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SLC35E2P0CK97 266 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CCL3P10147 92 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 NR2F6P10588 404 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PPIAP62937 165 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ASPHQ12797 758 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ARHGAP11AQ6P4F7 1023 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 C3P1Q6ZMU1 363 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 RPS27LQ71UM5 84 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TAOK1Q7L7X3 1001 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 METTL4Q8N3J2 472 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ZNF441Q8N8Z8 693 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 MYRIPQ8NFW9 859 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 OR4F6Q8NGB9 312 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TRPC4APQ8TEL6 797 aa12.62□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PAQR8Q8TEZ7 354 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms