RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 KCNE2Q9Y6J6 123 aa12.96□□□□□ -0.33
TRIM4-203ENST00000355947 ANKRD36A6QL64 1941 aa12.96□□□□□ -0.33
TRIM4-203ENST00000355947 ZNF670-ZNF695F2Z2N8 137 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 SGTAO43765 313 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 ELNP15502 786 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 ALAS2P22557 587 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 CPN2P22792 545 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 CRYBB2P43320 205 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 LIM2P55344 173 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 DCDC1P59894 354 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 CHRNEQ04844 493 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 COX10Q12887 443 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 MAB21L1Q13394 359 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 MRPL10Q7Z7H8 261 aaKnown RBP12.96□□□□□ -0.34
TRIM4-203ENST00000355947 DOK4Q8TEW6 326 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 RNFT2Q96EX2 444 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 C11orf24Q96F05 449 aaPredicted RBP12.96□□□□□ -0.34
TRIM4-203ENST00000355947 EGLN3Q9H6Z9 239 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 MGAT4AQ9UM21 535 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 MYOFQ9NZM1 2061 aa12.96□□□□□ -0.34
TRIM4-203ENST00000355947 TEX28O15482 410 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ERAL1O75616 437 aaKnown RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 NR2F1P10589 423 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ETV3P41162 512 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ZNF81P51508 661 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 RPS7P62081 194 aaKnown RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ABATP80404 500 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 EIF4HQ15056 248 aaKnown RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 FCN2Q15485 313 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 LRRC17Q8N6Y2 441 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 UXS1Q8NBZ7 420 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 OR4F15Q8NGB8 312 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 RASSF5Q8WWW0 418 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ZBED6CLQ96FA7 236 aaPredicted RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 WFDC6Q9BQY6 131 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 SPRTNQ9H040 489 aaPredicted RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 MVB12BQ9H7P6 319 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 PLCXD1Q9NUJ7 323 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 EXTL2Q9UBQ6 330 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ZFR2Q9UPR6 939 aaKnown RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 PADI2Q9Y2J8 665 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 DVL2O14641 736 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 POLR1CO15160 346 aaPredicted RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 EEF1E1O43324 174 aaKnown RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ORC5O43913 435 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 H1F0P07305 194 aaKnown RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ZNF250P15622 560 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 LHCGRP22888 699 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 CD70P32970 193 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 PTGS2P35354 604 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 SLC35F1Q5T1Q4 408 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 SLC24A5Q71RS6 500 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ASB11Q8WXH4 323 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 SORCS1Q8WY21 1168 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.342e-10■□□□□ 10.2
TRIM4-203ENST00000355947 WRAP53Q9BUR4 548 aaKnown RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 SLC12A9Q9BXP2 914 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 SAP130Q9H0E3 1048 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 CNIH4Q9P003 139 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 CATP04040 527 aaKnown RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 HRGP04196 525 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ATP1B2P14415 290 aaPredicted RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 DRD5P21918 477 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 TIA1P31483 386 aaKnown RBP eCLIP12.95□□□□□ -0.344e-7■□□□□ 9.9
TRIM4-203ENST00000355947 SRP9P49458 86 aaKnown RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 CFAP206Q8IYR0 622 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 TMEM145Q8NBT3 493 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 CHST14Q8NCH0 376 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 NEIL3Q8TAT5 605 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 GTF3C2Q8WUA4 911 aaPredicted RBP12.95□□□□□ -0.34
TRIM4-203ENST00000355947 ASZ1Q8WWH4 475 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 UPRTQ96BW1 309 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 TMEM19Q96HH6 336 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 FCRL4Q96PJ5 515 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 NUDT15Q9NV35 164 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 A3GALT2U3KPV4 340 aa12.95□□□□□ -0.34
TRIM4-203ENST00000355947 DICER1Q9UPY3 1922 aaKnown RBP12.94□□□□□ -0.34
TRIM4-203ENST00000355947 FAM183AA6NL82 134 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 SCAMP1O15126 338 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-203ENST00000355947 C8GP07360 202 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 ARSBP15848 533 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 RECQLP46063 649 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-203ENST00000355947 ASMTP46597 345 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 SLC9A3P48764 834 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 CTSCP53634 463 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 XKRXQ6PP77 449 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 MACC1Q6ZN28 852 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 TRPV1Q8NER1 839 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 BBS10Q8TAM1 723 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 TM9SF4Q92544 642 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 SIPA1Q96FS4 1042 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 MAGEB10Q96LZ2 347 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-203ENST00000355947 FOPNLQ96NB1 174 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 RIOK2Q9BVS4 552 aaKnown RBP12.94□□□□□ -0.34
TRIM4-203ENST00000355947 ARHGAP39Q9C0H5 1083 aa12.94□□□□□ -0.34
TRIM4-203ENST00000355947 NXF2Q9GZY0 626 aaKnown RBP12.94□□□□□ -0.34
TRIM4-203ENST00000355947 C3orf14Q9HBI5 128 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms